RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 RPP21Q9H633 154 aaKnown RBP13.91□□□□□ -0.18
PCCB-208ENST00000468777 COX8CQ7Z4L0 72 aa13.9□□□□□ -0.18
PCCB-208ENST00000468777 OVOL2Q9BRP0 275 aa13.9□□□□□ -0.18
PCCB-208ENST00000468777 NDFIP1Q9BT67 221 aa13.9□□□□□ -0.18
PCCB-208ENST00000468777 NPIPB6E9PJ23 425 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 TRGC2P03986 189 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 NHLRC4P0CG21 123 aaPredicted RBP13.89□□□□□ -0.19
PCCB-208ENST00000468777 TCL1AP56279 114 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 RCHY1Q96PM5 261 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 AGPAT4-IT1Q9H0P7 198 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 PPP1R14DQ9NXH3 145 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 TRAV12-2A0A075B6T6 113 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 KIR3DS1Q14943 382 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 CT83Q5H943 113 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 TMEM78Q5T7P6 136 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 TSKUQ8WUA8 353 aa13.89□□□□□ -0.19
PCCB-208ENST00000468777 CRIP1P50238 77 aa13.88□□□□□ -0.19
PCCB-208ENST00000468777 C9orf47Q6ZRZ4 202 aa13.88□□□□□ -0.19
PCCB-208ENST00000468777 CSNK1G2-AS1Q8NCQ2 148 aa13.88□□□□□ -0.19
PCCB-208ENST00000468777 RNF183Q96D59 192 aa13.88□□□□□ -0.19
PCCB-208ENST00000468777 A8MWL6 223 aa13.87□□□□□ -0.19
PCCB-208ENST00000468777 J3KRW8 73 aa13.87□□□□□ -0.19
PCCB-208ENST00000468777 SPRY2O43597 315 aa13.87□□□□□ -0.19
PCCB-208ENST00000468777 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
PCCB-208ENST00000468777 CRXO43186 299 aaPredicted RBP13.87□□□□□ -0.19
PCCB-208ENST00000468777 ZNF138P52744 262 aa13.87□□□□□ -0.19
PCCB-208ENST00000468777 C1QTNF4Q9BXJ3 329 aa13.87□□□□□ -0.19
PCCB-208ENST00000468777 SMUG1Q53HV7 270 aa13.86□□□□□ -0.19
PCCB-208ENST00000468777 OR2D3Q8NGH3 330 aa13.86□□□□□ -0.19
PCCB-208ENST00000468777 NEU1Q99519 415 aa13.86□□□□□ -0.19
PCCB-208ENST00000468777 NAT8BQ9UHF3 227 aa13.86□□□□□ -0.19
PCCB-208ENST00000468777 FAM162BQ5T6X4 162 aa13.85□□□□□ -0.19
PCCB-208ENST00000468777 IGHV3OR16-12A0A075B7B8 117 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 CDKN1BP46527 198 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 NUP35Q8NFH5 326 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 LINC00477Q96M19 166 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 GFRA4Q9GZZ7 299 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 TP53TG1Q9Y2A0 90 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 U3KQK5 164 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 HIGD1CA8MV81 97 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 SPINK4O60575 86 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 SH2D1AO60880 128 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 OR11H2Q8NH07 326 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 LENEPQ9Y5L5 61 aa13.84□□□□□ -0.19
PCCB-208ENST00000468777 FAM231BA6NCW3 169 aa13.83□□□□□ -0.2
PCCB-208ENST00000468777 PHOX2AO14813 284 aa13.83□□□□□ -0.2
PCCB-208ENST00000468777 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.2
PCCB-208ENST00000468777 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.2
PCCB-208ENST00000468777 RBMY1FQ15415 496 aaKnown RBP13.83□□□□□ -0.2
PCCB-208ENST00000468777 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
PCCB-208ENST00000468777 C1orf158Q8N1D5 194 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 FRZBQ92765 325 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 FAM19A4Q96LR4 140 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 TRAPPC1Q9Y5R8 145 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 INSP01308 110 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 S100A6P06703 90 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 GFI1BQ5VTD9 330 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 GTSF1Q8WW33 167 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 ODF3Q96PU9 254 aa13.82□□□□□ -0.2
PCCB-208ENST00000468777 FABP5P3A8MUU1 101 aa13.81□□□□□ -0.2
PCCB-208ENST00000468777 TRGC1P0CF51 173 aa13.81□□□□□ -0.2
PCCB-208ENST00000468777 FABP9Q0Z7S8 132 aa13.81□□□□□ -0.2
PCCB-208ENST00000468777 MRPL54Q6P161 138 aaKnown RBP13.81□□□□□ -0.2
PCCB-208ENST00000468777 TMEM189A5PLL7 270 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BKO60814 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 AMBPP02760 352 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BJP06899 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 GZMBP10144 247 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BOP23527 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 TSPOP30536 169 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BBP33778 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 LEPP41159 167 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BDP58876 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BCP62807 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST2H2BEQ16778 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 COX19Q49B96 90 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.8□□□□□ -0.2
PCCB-208ENST00000468777 PRR9Q5T870 116 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 ZNF705AQ6ZN79 300 aaPredicted RBP13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BHQ93079 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BNQ99877 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 HIST1H2BMQ99879 126 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 X6R8D5 127 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 PRM2P04554 102 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 ZFAND2AQ8N6M9 145 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 TMEM208Q9BTX3 173 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 GNB1LQ9BYB4 327 aa13.8□□□□□ -0.2
PCCB-208ENST00000468777 TRAV12-3A0A0B4J271 114 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 DEFB4AO15263 64 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 FOXA3P55318 350 aaPredicted RBP13.79□□□□□ -0.2
PCCB-208ENST00000468777 WDR73Q6P4I2 378 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 RASL11AQ6T310 242 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 GOLT1BQ9Y3E0 138 aa13.79□□□□□ -0.2
PCCB-208ENST00000468777 DNAH7Q8WXX0 4024 aa13.78□□□□□ -0.2
PCCB-208ENST00000468777 SNURFLB1AK76 121 aa13.78□□□□□ -0.2
PCCB-208ENST00000468777 KLLNB2CW77 178 aa13.78□□□□□ -0.2
PCCB-208ENST00000468777 GPX1P07203 203 aa13.78□□□□□ -0.2
PCCB-208ENST00000468777 CRISP2P16562 243 aa13.78□□□□□ -0.2
PCCB-208ENST00000468777 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms