RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ETV6P41212 452 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 GTF2A1P52655 376 aaPredicted RBP0.24□□□□□ -2.37
SMC4-205ENST00000465563 RPL37P61927 97 aaKnown RBP0.24□□□□□ -2.37
SMC4-205ENST00000465563 LYPD5Q6UWN5 251 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 MRPL36Q9P0J6 103 aaKnown RBP0.24□□□□□ -2.37
SMC4-205ENST00000465563 LRP5O75197 1615 aa0.24□□□□□ -2.37
SMC4-205ENST00000465563 KIAA0100Q14667 2235 aaKnown RBP0.23□□□□□ -2.37
SMC4-205ENST00000465563 TMEM189A5PLL7 270 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 CDC42EP2O14613 210 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 UQCRQO14949 82 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 RHOHQ15669 191 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 OTOSQ8NHW6 89 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 RBBP6Q7Z6E9 1792 aaKnown RBP0.23□□□□□ -2.37
SMC4-205ENST00000465563 MYO7AQ13402 2215 aa0.23□□□□□ -2.37
SMC4-205ENST00000465563 TPRP12270 2363 aaKnown RBP0.23□□□□□ -2.37
SMC4-205ENST00000465563 RREB1Q92766 1687 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 TMEM30CPA0ZSE6 113 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 HIGD1CA8MV81 97 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 NEFHP12036 1026 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 B2MP61769 119 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 SPINK13Q1W4C9 94 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 SMIM15Q7Z3B0 74 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 OR8J3Q8NGG0 315 aa0.22□□□□□ -2.37
SMC4-205ENST00000465563 CPDO75976 1380 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 IGKCP01834 107 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 TCRAP04437 139 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 S100GP29377 79 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 ZNF56Q15929 161 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 TMEM35BQ8NCS4 154 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 DMAC1Q96GE9 116 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 SMIM7Q9BQ49 75 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 CASZ1Q86V15 1759 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 ZCCHC6Q5VYS8 1495 aaKnown RBP0.21□□□□□ -2.38
SMC4-205ENST00000465563 F5P12259 2224 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 OVOS2A0A0G2JMS6 1433 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 ARHGAP31Q2M1Z3 1444 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 MYH13Q9UKX3 1938 aa0.21□□□□□ -2.38
SMC4-205ENST00000465563 A0A0G2JMM0 328 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 TPST1O60507 370 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 KDELR1P24390 212 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 LSM3P62310 102 aaKnown RBP0.2□□□□□ -2.38
SMC4-205ENST00000465563 OR4S1Q8NGB4 309 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 SELENOSQ9BQE4 189 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 GINS2Q9Y248 185 aa0.2□□□□□ -2.38
SMC4-205ENST00000465563 VIRMAQ69YN4 1812 aaKnown RBP0.2□□□□□ -2.38
SMC4-205ENST00000465563 FAT4Q6V0I7 4981 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 JMJD1CQ15652 2540 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 PLXNA1Q9UIW2 1896 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 A0A096LNT2 108 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 IGHV1-24A0A0C4DH33 117 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 A0A1B0GX51 115 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 J3KT08 172 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 CKS2P33552 79 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 IDO2Q6ZQW0 420 aa0.19□□□□□ -2.38
SMC4-205ENST00000465563 SKA2Q8WVK7 121 aaPredicted RBP0.19□□□□□ -2.38
SMC4-205ENST00000465563 METTL1Q9UBP6 276 aaKnown RBP0.19□□□□□ -2.38
SMC4-205ENST00000465563 PTPRZ1P23471 2315 aaPredicted RBP0.19□□□□□ -2.38
SMC4-205ENST00000465563 CDK12Q9NYV4 1490 aaPredicted RBP0.18□□□□□ -2.38
SMC4-205ENST00000465563 TRAV36DV7A0A075B6V5 113 aa0.18□□□□□ -2.38
SMC4-205ENST00000465563 H0YJX3 145 aa0.18□□□□□ -2.38
SMC4-205ENST00000465563 ADCYAP1P18509 176 aa0.18□□□□□ -2.38
SMC4-205ENST00000465563 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
SMC4-205ENST00000465563 CDK5RAP2Q96SN8 1893 aa0.18□□□□□ -2.38
SMC4-205ENST00000465563 GNG14A0A1W2PPG7 69 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 TSTD3H0UI37 97 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 MAST4O15021 2626 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 CD3DP04234 171 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 IGF2RP11717 2491 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 IL7P13232 177 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 SDC4P31431 198 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 KDM5CP41229 1560 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 BLMP54132 1417 aaPredicted RBP0.17□□□□□ -2.38
SMC4-205ENST00000465563 OR8B8Q15620 311 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 HSD17B12Q53GQ0 312 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 TMEM91Q6ZNR0 172 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 HSPB11Q9Y547 144 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 KIF13AQ9H1H9 1805 aa0.17□□□□□ -2.38
SMC4-205ENST00000465563 TTC28Q96AY4 2481 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 CXorf51AA0A1B0GTR3 108 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 PNMA8CA0A1B0GUJ8 204 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 DPM2O94777 84 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 SCTP09683 121 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 PCBD1P61457 104 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 PSPHP78330 225 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 KLKP1Q107X0 134 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 OR8I2Q8N0Y5 310 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 ATG5Q9H1Y0 275 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 DNAJC15Q9Y5T4 150 aa0.16□□□□□ -2.38
SMC4-205ENST00000465563 DOCK11Q5JSL3 2073 aa0.15□□□□□ -2.38
SMC4-205ENST00000465563 A0A1B0GW64 132 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 TNFSF15O95150 251 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 MT-ND4LP03901 98 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 CCKP06307 115 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 TAC4Q86UU9 113 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 MYH6P13533 1939 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 AKAP11Q9UKA4 1901 aa0.15□□□□□ -2.39
SMC4-205ENST00000465563 F8P00451 2351 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 ZNF142P52746 1687 aaPredicted RBP0.14□□□□□ -2.39
SMC4-205ENST00000465563 ABCA12Q86UK0 2595 aa0.14□□□□□ -2.39
SMC4-205ENST00000465563 CADP27708 2225 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms