RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
HMGN1-210ENST00000464078 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
HMGN1-210ENST00000464078 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
HMGN1-210ENST00000464078 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
HMGN1-210ENST00000464078 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
HMGN1-210ENST00000464078 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
HMGN1-210ENST00000464078 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
HMGN1-210ENST00000464078 LELP1Q5T871 98 aa11.47□□□□□ -0.57
HMGN1-210ENST00000464078 TM2D2Q9BX73 214 aa11.47□□□□□ -0.57
HMGN1-210ENST00000464078 TRAV21A0A0B4J279 112 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 TRBV6-4A0A1B0GX49 114 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 GNRH2O43555 120 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 CIDEAO60543 219 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 TYMSP04818 313 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 RHOHQ15669 191 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 ATP5SQ99766 215 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 SDF2L1Q9HCN8 221 aa11.46□□□□□ -0.57
HMGN1-210ENST00000464078 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 WFDC2Q14508 124 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 HMCN2Q8NDA2 5059 aa11.45□□□□□ -0.58
HMGN1-210ENST00000464078 IGHV3-30P01768 117 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 IGHV3-30-3P0DP02 117 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 IGHV3-30-5P0DP03 117 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 TAS2R45P59539 299 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 CFAP126Q5VTH2 177 aa11.44□□□□□ -0.58
HMGN1-210ENST00000464078 RS1O15537 224 aa11.43□□□□□ -0.58
HMGN1-210ENST00000464078 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
HMGN1-210ENST00000464078 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
HMGN1-210ENST00000464078 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
HMGN1-210ENST00000464078 LRP1Q07954 4544 aaKnown RBP11.43□□□□□ -0.58
HMGN1-210ENST00000464078 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 CMTM2Q8TAZ6 248 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 HYLS1Q96M11 299 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 TREM1Q9NP99 234 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
HMGN1-210ENST00000464078 TRAV8-3A0A0A6YYJ7 113 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 F6UZH7 168 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
HMGN1-210ENST00000464078 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 DPPA3Q6W0C5 159 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 NMES1Q9C002 83 aa11.41□□□□□ -0.58
HMGN1-210ENST00000464078 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 PGPA6NDG6 321 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 H0YIZ8 118 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 KRTAP10-4P60372 401 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-210ENST00000464078 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 ATP6V0E2Q8NHE4 81 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 PTH2Q96A98 100 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
HMGN1-210ENST00000464078 FAM240BA0A1B0GVZ2 78 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 LINC00694P0DN24 101 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 ASAH1Q13510 395 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 TOR2AQ5JU69 321 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 Q8N3U1 123 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 CCDC32Q9BV29 185 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
HMGN1-210ENST00000464078 LRRC37A5PQ49AS3 106 aa11.38□□□□□ -0.59
HMGN1-210ENST00000464078 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
HMGN1-210ENST00000464078 COX11Q9Y6N1 276 aa11.38□□□□□ -0.59
HMGN1-210ENST00000464078 LECT2O14960 151 aa11.37□□□□□ -0.59
HMGN1-210ENST00000464078 SIX6O95475 246 aa11.37□□□□□ -0.59
HMGN1-210ENST00000464078 OXTP01178 125 aa11.37□□□□□ -0.59
HMGN1-210ENST00000464078 ZNF506Q5JVG8 444 aa11.37□□□□□ -0.59
HMGN1-210ENST00000464078 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
HMGN1-210ENST00000464078 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-210ENST00000464078 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
HMGN1-210ENST00000464078 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
HMGN1-210ENST00000464078 NDFIP1Q9BT67 221 aa11.36□□□□□ -0.59
HMGN1-210ENST00000464078 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
HMGN1-210ENST00000464078 HSPB11Q9Y547 144 aa11.36□□□□□ -0.59
HMGN1-210ENST00000464078 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
HMGN1-210ENST00000464078 TAAR5O14804 337 aa11.35□□□□□ -0.59
HMGN1-210ENST00000464078 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
HMGN1-210ENST00000464078 DAZ4Q86SG3 579 aaKnown RBP11.35□□□□□ -0.59
HMGN1-210ENST00000464078 DAZ3Q9NR90 486 aaKnown RBP11.35□□□□□ -0.59
HMGN1-210ENST00000464078 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
HMGN1-210ENST00000464078 FAT3Q8TDW7 4589 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 A0A087WWC5 75 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 PGPEP1LA6NFU8 196 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 EIF3GO75821 320 aaKnown RBP eCLIP11.34□□□□□ -0.59
HMGN1-210ENST00000464078 RNASE3P12724 160 aaKnown RBP11.34□□□□□ -0.59
HMGN1-210ENST00000464078 ZNF80P51504 273 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-210ENST00000464078 GNG5P63218 68 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 MZT2BQ6NZ67 158 aa11.34□□□□□ -0.59
HMGN1-210ENST00000464078 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms