RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 KLLNB2CW77 178 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 J3KRW8 73 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 M0R2Z0 102 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 LTAP01374 205 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 MGST1P10620 155 aaKnown RBP4.33□□□□□ -1.72
NUP98-208ENST00000461047 MIFP14174 115 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 IFITM2Q01629 132 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 TMEM241Q24JQ0 296 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 RRN3P1Q2M238 152 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 DEFB135Q30KP9 77 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 FAM162BQ5T6X4 162 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 ZNF493Q6ZR52 646 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 SBSPONQ8IVN8 264 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 OR11H2Q8NH07 326 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 Q8TAT8 98 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 C2CD4CQ8TF44 421 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 PCNPQ8WW12 178 aaKnown RBP4.33□□□□□ -1.72
NUP98-208ENST00000461047 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 SMIM7Q9BQ49 75 aa4.33□□□□□ -1.72
NUP98-208ENST00000461047 TRAV12-2A0A075B6T6 113 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 CBY3A6NI87 242 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 SNURFLB1AK76 121 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 C9JCJ5 164 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 GCGP01275 180 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 ORM1P02763 201 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 PFN1P07737 140 aaKnown RBP4.32□□□□□ -1.72
NUP98-208ENST00000461047 SRP19P09132 144 aaKnown RBP4.32□□□□□ -1.72
NUP98-208ENST00000461047 HTN1P15515 57 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 RPS20P60866 119 aaKnown RBP4.32□□□□□ -1.72
NUP98-208ENST00000461047 NDUFA5Q16718 116 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 CENPWQ5EE01 88 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 Q6AWC8 147 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 Q86TA4 180 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 EIF4E3Q8N5X7 224 aaKnown RBP4.32□□□□□ -1.72
NUP98-208ENST00000461047 ZFAND2AQ8N6M9 145 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 FAM19A4Q96LR4 140 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 TM2D3Q9BRN9 247 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 PARLQ9H300 379 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 SDF2L1Q9HCN8 221 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 CUBNO60494 3623 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 MGAM2Q2M2H8 2515 aa4.32□□□□□ -1.72
NUP98-208ENST00000461047 SORL1Q92673 2214 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 IGHV1OR15-1A0A075B7D0 117 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 LINC00862A6NCI5 91 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 F5H697 171 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 TRIAP1O43715 76 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 PRB4P10163 310 aaPredicted RBP4.31□□□□□ -1.72
NUP98-208ENST00000461047 S100A4P26447 101 aaKnown RBP4.31□□□□□ -1.72
NUP98-208ENST00000461047 OR5I1Q13606 314 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 PRR27Q6MZM9 219 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 ZNF705AQ6ZN79 300 aaPredicted RBP4.31□□□□□ -1.72
NUP98-208ENST00000461047 COX8CQ7Z4L0 72 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 COMMD7Q86VX2 200 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 C15orf54Q8N8G6 183 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 CSNK1G2-AS1Q8NCQ2 148 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 C16orf74Q96GX8 76 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 OVOL2Q9BRP0 275 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 NAT8Q9UHE5 227 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 NAGKQ9UJ70 344 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 U3KQK5 164 aa4.31□□□□□ -1.72
NUP98-208ENST00000461047 CXorf65A6NEN9 183 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 B4DEV8 164 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 F8W036 122 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 CRXO43186 299 aaPredicted RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 ZNF324O75467 553 aaPredicted RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 P01737 135 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 SFTA3P0C7M3 94 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 ASIPP42127 132 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 PNRC1Q12796 327 aaPredicted RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 BTN1A1Q13410 526 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 ANXA2RQ3ZCQ2 193 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 C1orf158Q8N1D5 194 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 NHLRC2Q8NBF2 726 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 OCC1Q8TAD7 63 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 TVP23CQ96ET8 276 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 SPXQ9BT56 116 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 DERL1Q9BUN8 251 aa4.3□□□□□ -1.72
NUP98-208ENST00000461047 TIMM8BQ9Y5J9 83 aaPredicted RBP4.3□□□□□ -1.72
NUP98-208ENST00000461047 IGHV4-28A0A0C4DH34 117 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 LYRM9A8MSI8 78 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
NUP98-208ENST00000461047 PPP1R2P9O14990 202 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 SH2D1AO60880 128 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 EMP1P54849 157 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 RPL19P84098 196 aaKnown RBP4.29□□□□□ -1.72
NUP98-208ENST00000461047 TDRG1Q3Y452 100 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 MUC21Q5SSG8 566 aa4.29□□□□□ -1.72
NUP98-208ENST00000461047 IBA57Q5T440 356 aaKnown RBP4.29□□□□□ -1.72
NUP98-208ENST00000461047 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms