RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 DRAM1Q8N682 238 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 OR10G8Q8NGN5 311 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 OR4A5Q8NH83 315 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 PIFOQ8TCI5 191 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 LSM10Q969L4 123 aaKnown RBP3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 SMIM7Q9BQ49 75 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 GNB1LQ9BYB4 327 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 TP53TG3Q9ULZ0 132 aa3.7□□□□□ -1.82
ATPAF1-203ENST00000460928 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 NOTCH3Q9UM47 2321 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 TMEM89A2RUT3 159 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 LY6LH3BQJ8 138 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 BUB1B-PAK6H3BSN5 160 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 H3BUX3 64 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 ISLRO14498 428 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 NUPR1O60356 82 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 CA2P00918 260 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 CRYGDP07320 174 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 IGLL1P15814 213 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 RPL35AP18077 110 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 CNTFRP26992 372 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 SEC61GP60059 68 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 FAM106AQ4KMX7 169 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 Q6AWC8 147 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 ADAMTSL5Q6ZMM2 481 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 Q6ZUT4 128 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 OR11H6Q8NGC7 330 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 OR4X2Q8NGF9 303 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 OR9G1Q8NH87 305 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 MRPL53Q96EL3 112 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 S1PR3Q99500 378 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 VGLL1Q99990 258 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 MRPL20Q9BYC9 149 aaKnown RBP3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 TMEM191AQ9H0A3 160 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 PPDPFQ9H3Y8 114 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 LINC00574Q9H8X3 128 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 DPM3Q9P2X0 92 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 TRRAPQ9Y4A5 3859 aa3.69□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A087WZ39 114 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 TRBV6-6A0A0A6YYG2 114 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 SRRM4A7MD48 611 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 FNDC10F2Z333 226 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 H3BMG7 143 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 TNFSF12O43508 249 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 BUB3O43684 328 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 RBP4P02753 201 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 COX8AP10176 69 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 ORM2P19652 201 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 MDKP21741 143 aaPredicted RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 HRH1P35367 487 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 ASIPP42127 132 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 FXYD4P59646 89 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 HILS1P60008 231 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 UBE2G1P62253 170 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 RPL30P62888 115 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 SERF2P84101 59 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 ARL16Q0P5N6 197 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 MRPL23Q16540 153 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 RASL11AQ6T310 242 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 Q6ZS49 121 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 SLC25A48Q6ZT89 311 aaKnown RBP3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 MOB3BQ86TA1 216 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 LHFPL1Q86WI0 220 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 BPIFA4PQ86YQ2 179 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 C8orf31Q8N9H6 132 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 TMEM230Q96A57 120 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 DUX3Q96PT4 197 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 OR4C12Q96R67 309 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 SCRT2Q9NQ03 307 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 CCL28Q9NRJ3 127 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 LY96Q9Y6Y9 160 aa3.68□□□□□ -1.82
ATPAF1-203ENST00000460928 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A087WYN8 130 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 IGHV1-3A0A0C4DH29 117 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A1B0GUS0 222 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 A0A1B0GUV1 79 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 A6NDX4 124 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 SMIM1B2RUZ4 78 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 SYS1-DBNDD2H3BUS1 97 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 H3BUT2 72 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 CA1P00915 261 aaPredicted RBP3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 IGKV1D-33P01593 117 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 IGKV1-33P01594 117 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 HLA-DQA1P01909 254 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 OR5AL1P0C617 328 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 VDAC1P21796 283 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 G6PCP35575 357 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 KIR2DS2P43631 304 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 PSMB3P49720 205 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 KRTAP10-3P60369 221 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 BLCAPP62952 87 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 CCL20P78556 96 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 HES1Q14469 280 aa3.67□□□□□ -1.82
ATPAF1-203ENST00000460928 C10orf99Q6UWK7 81 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms