RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CRIP1P50238 77 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 FAM162BQ5T6X4 162 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 Q8NAQ8 132 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 C11orf68Q9H3H3 251 aaKnown RBP11.22□□□□□ -0.61
SDF4-204ENST00000459994 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
SDF4-204ENST00000459994 F8W036 122 aa11.21□□□□□ -0.61
SDF4-204ENST00000459994 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
SDF4-204ENST00000459994 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
SDF4-204ENST00000459994 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
SDF4-204ENST00000459994 ADCYAP1P18509 176 aa11.21□□□□□ -0.61
SDF4-204ENST00000459994 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
SDF4-204ENST00000459994 C10orf91Q5T1B1 145 aa11.21□□□□□ -0.61
SDF4-204ENST00000459994 H7BYZ3 331 aa11.2□□□□□ -0.62
SDF4-204ENST00000459994 K7EN84 100 aa11.2□□□□□ -0.62
SDF4-204ENST00000459994 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
SDF4-204ENST00000459994 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
SDF4-204ENST00000459994 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
SDF4-204ENST00000459994 X6R8D5 127 aa11.2□□□□□ -0.62
SDF4-204ENST00000459994 VPS13DQ5THJ4 4388 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 IGHV4-28A0A0C4DH34 117 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 C19orf71A6NCJ1 209 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 KRBOX1C9JBD0 128 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 SH2D1AO60880 128 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 PNRC1Q12796 327 aaPredicted RBP11.19□□□□□ -0.62
SDF4-204ENST00000459994 OR5I1Q13606 314 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 Q6ZQT7 251 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 LINC01587Q99440 93 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 TMEM208Q9BTX3 173 aa11.19□□□□□ -0.62
SDF4-204ENST00000459994 CARHSP1Q9Y2V2 147 aaKnown RBP11.19□□□□□ -0.62
SDF4-204ENST00000459994 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 TDRG1Q3Y452 100 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 PRR27Q6MZM9 219 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 FAM231DQ6ZW35 169 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 DAZAP1Q96EP5 407 aaKnown RBP11.18□□□□□ -0.62
SDF4-204ENST00000459994 NEU1Q99519 415 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 C11orf21Q9P2W6 132 aa11.18□□□□□ -0.62
SDF4-204ENST00000459994 ADIRFQ15847 76 aa11.17□□□□□ -0.62
SDF4-204ENST00000459994 ISOC2Q96AB3 205 aa11.17□□□□□ -0.62
SDF4-204ENST00000459994 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
SDF4-204ENST00000459994 KLK5Q9Y337 293 aaPredicted RBP11.17□□□□□ -0.62
SDF4-204ENST00000459994 DNAH6Q9C0G6 4158 aa11.17□□□□□ -0.62
SDF4-204ENST00000459994 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 NUDT10Q8NFP7 164 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 NUDT11Q96G61 164 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 CELA1Q9UNI1 258 aa11.16□□□□□ -0.62
SDF4-204ENST00000459994 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
SDF4-204ENST00000459994 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
SDF4-204ENST00000459994 P01737 135 aa11.15□□□□□ -0.62
SDF4-204ENST00000459994 ORM1P02763 201 aa11.15□□□□□ -0.62
SDF4-204ENST00000459994 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
SDF4-204ENST00000459994 DNAH10Q8IVF4 4471 aa11.15□□□□□ -0.63
SDF4-204ENST00000459994 TMEM189A5PLL7 270 aa11.14□□□□□ -0.63
SDF4-204ENST00000459994 CXCL1P09341 107 aa11.14□□□□□ -0.63
SDF4-204ENST00000459994 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
SDF4-204ENST00000459994 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
SDF4-204ENST00000459994 IBA57Q5T440 356 aaKnown RBP11.14□□□□□ -0.63
SDF4-204ENST00000459994 RNASE7Q9H1E1 156 aaKnown RBP11.14□□□□□ -0.63
SDF4-204ENST00000459994 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
SDF4-204ENST00000459994 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 CBY3A6NI87 242 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 ZNF705GA8MUZ8 300 aaPredicted RBP11.13□□□□□ -0.63
SDF4-204ENST00000459994 B4DEV8 164 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 M0R036 132 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 GATCO43716 136 aaKnown RBP11.13□□□□□ -0.63
SDF4-204ENST00000459994 RPS20P60866 119 aaKnown RBP11.13□□□□□ -0.63
SDF4-204ENST00000459994 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 ZNF493Q6ZR52 646 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 Q6ZTC4 211 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 C15orf54Q8N8G6 183 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 OR10G8Q8NGN5 311 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
SDF4-204ENST00000459994 TYMSP04818 313 aa11.12□□□□□ -0.63
SDF4-204ENST00000459994 MIFP14174 115 aa11.12□□□□□ -0.63
SDF4-204ENST00000459994 CT83Q5H943 113 aa11.12□□□□□ -0.63
SDF4-204ENST00000459994 RPP21Q9H633 154 aaKnown RBP11.12□□□□□ -0.63
SDF4-204ENST00000459994 TP53TG3Q9ULZ0 132 aa11.12□□□□□ -0.63
SDF4-204ENST00000459994 APLNQ9ULZ1 77 aa11.12□□□□□ -0.63
SDF4-204ENST00000459994 XKRY2A2RUG3 117 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 GNRH2O43555 120 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 APOC3P02656 99 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 MT-ND4LP03901 98 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 HTN1P15515 57 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 AZU1P20160 251 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
SDF4-204ENST00000459994 LGALS9CQ6DKI2 356 aa11.11□□□□□ -0.63
SDF4-204ENST00000459994 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms