RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 ZMAT4Q9H898 229 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 FLNCQ14315 2725 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 PF4V1P10720 104 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 FOXC2Q99958 501 aa13.34□□□□□ -0.27
CCDC144A-210ENST00000456009 EDN2P20800 178 aa13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 UTP20O75691 2785 aaKnown RBP13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 A6NDX4 124 aa13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 AVPP01185 164 aa13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 TM4SF20Q53R12 229 aa13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
CCDC144A-210ENST00000456009 K7EP13 123 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 M0R381 172 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 SRD5A1P18405 259 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 SEC11AP67812 179 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 LINC00477Q96M19 166 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 CSPG4Q6UVK1 2322 aa13.32□□□□□ -0.28
CCDC144A-210ENST00000456009 ATP5J2P56134 94 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 LAGE3Q14657 143 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 OR10J6PQ8NGY7 276 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 SPOCK3Q9BQ16 436 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 PRSS47A8MTI9 375 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 OR9G4Q8NGQ1 327 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 NAA38Q9BRA0 125 aaKnown RBP13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
CCDC144A-210ENST00000456009 TMEM8BA6NDV4 472 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 IGKCP01834 107 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 USMG5Q96IX5 58 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 SIVA1O15304 175 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 GNRH2O43555 120 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 RNASE4P34096 147 aaKnown RBP13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 ANXA2RQ3ZCQ2 193 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 RHPN1-AS1Q9BWJ2 59 aa13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
CCDC144A-210ENST00000456009 RBX1P62877 108 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 CLEC2AQ6UVW9 174 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 TMEM160Q9NX00 188 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 OVOL1O14753 267 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 HSD52Q0P140 79 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 TMEM95Q3KNT9 176 aa13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 C14orf178Q8N769 122 aaPredicted RBP13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
CCDC144A-210ENST00000456009 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 TRAV21A0A0B4J279 112 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 MSMBP08118 114 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 NRGNQ92686 78 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 FAM19A4Q96LR4 140 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 MYOZ3Q8TDC0 251 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 RASL10AQ92737 203 aa13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 RPL39LQ96EH5 51 aaKnown RBP13.28□□□□□ -0.28
CCDC144A-210ENST00000456009 PIEZO1Q92508 2521 aa13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 IGLV1-40P01703 118 aa13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 SRSF1Q07955 248 aaKnown RBP eCLIP13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 WFDC12Q8WWY7 111 aa13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 RAB37Q96AX2 223 aa13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 JMJD8Q96S16 334 aa13.27□□□□□ -0.28
CCDC144A-210ENST00000456009 ATP5LO75964 103 aa13.27□□□□□ -0.29
CCDC144A-210ENST00000456009 DPM2O94777 84 aa13.27□□□□□ -0.29
CCDC144A-210ENST00000456009 CBY1Q9Y3M2 126 aa13.27□□□□□ -0.29
CCDC144A-210ENST00000456009 H3BRM9 83 aa13.26□□□□□ -0.29
CCDC144A-210ENST00000456009 H3BUA1 57 aa13.26□□□□□ -0.29
CCDC144A-210ENST00000456009 BRI3O95415 125 aa13.26□□□□□ -0.29
CCDC144A-210ENST00000456009 MRAP2Q96G30 205 aa13.26□□□□□ -0.29
CCDC144A-210ENST00000456009 PHLDA3Q9Y5J5 127 aa13.26□□□□□ -0.29
CCDC144A-210ENST00000456009 A6NDN8 102 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 H3BUT2 72 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 NDUFS8O00217 210 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 RNASE3P12724 160 aaKnown RBP13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 ASIPP42127 132 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 SMIM2Q9BVW6 85 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 C9orf118A6NHY6 69 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 C10orf99Q6UWK7 81 aa13.25□□□□□ -0.29
CCDC144A-210ENST00000456009 GAGE12BA1L429 117 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 CFHR3Q02985 330 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 DAZ1Q9NQZ3 744 aaKnown RBP13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 IGSF10Q6WRI0 2623 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 DOPEY1Q5JWR5 2465 aa13.24□□□□□ -0.29
CCDC144A-210ENST00000456009 TRBV25-1A0A075B6N4 114 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 RNF223E7ERA6 249 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 SUMO2P61956 95 aaKnown RBP13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 MAPKAPK5-AS1Q8N8E1 139 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 A0A087WX48 190 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 GAGE10A6NGK3 116 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 MGPP08493 103 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 FXYD2P54710 66 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 DPH3P1Q9H4G8 78 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 MUC4Q99102 2169 aa13.23□□□□□ -0.29
CCDC144A-210ENST00000456009 A0A0G2JLM5 398 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 APRG1Q8IVJ8 170 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 ZANQ9Y493 2812 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 K7EMI3 77 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 GCSHP23434 173 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 DEFB104AQ8WTQ1 72 aa13.22□□□□□ -0.29
CCDC144A-210ENST00000456009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms