RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 OR7C2O60412 319 aa12.4□□□□□ -0.42
MSH6-206ENST00000455383 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
MSH6-206ENST00000455383 Q9HAA7 133 aa12.4□□□□□ -0.42
MSH6-206ENST00000455383 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
MSH6-206ENST00000455383 TYMSP04818 313 aa12.39□□□□□ -0.43
MSH6-206ENST00000455383 H2AFB2P0C5Z0 115 aa12.39□□□□□ -0.43
MSH6-206ENST00000455383 WFDC2Q14508 124 aa12.39□□□□□ -0.43
MSH6-206ENST00000455383 LAGE3Q14657 143 aa12.39□□□□□ -0.43
MSH6-206ENST00000455383 SLC25A29Q8N8R3 303 aa12.39□□□□□ -0.43
MSH6-206ENST00000455383 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
MSH6-206ENST00000455383 UBE2L3P68036 154 aaKnown RBP12.38□□□□□ -0.43
MSH6-206ENST00000455383 OR10J3Q5JRS4 329 aa12.38□□□□□ -0.43
MSH6-206ENST00000455383 LELP1Q5T871 98 aa12.38□□□□□ -0.43
MSH6-206ENST00000455383 LINC00528Q8N1L1 170 aa12.38□□□□□ -0.43
MSH6-206ENST00000455383 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
MSH6-206ENST00000455383 TRBV6-4A0A1B0GX49 114 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
MSH6-206ENST00000455383 CIDEAO60543 219 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 IGHV3-30P01768 117 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 IGHV3-33P01772 117 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 IGHV3-30-5P0DP03 117 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 TVP23CQ96ET8 276 aa12.37□□□□□ -0.43
MSH6-206ENST00000455383 C17orf112F2Z3M2 114 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 RS1O15537 224 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 RHOHQ15669 191 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 ARL6IP6Q8N6S5 226 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 TM2D2Q9BX73 214 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 OTORQ9NRC9 128 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 OR5AC2Q9NZP5 309 aa12.36□□□□□ -0.43
MSH6-206ENST00000455383 H0YIZ8 118 aa12.35□□□□□ -0.43
MSH6-206ENST00000455383 KHDC3LQ587J8 217 aa12.35□□□□□ -0.43
MSH6-206ENST00000455383 CFAP126Q5VTH2 177 aa12.35□□□□□ -0.43
MSH6-206ENST00000455383 KCNS1Q96KK3 526 aa12.35□□□□□ -0.43
MSH6-206ENST00000455383 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
MSH6-206ENST00000455383 DPPA3Q6W0C5 159 aa12.34□□□□□ -0.43
MSH6-206ENST00000455383 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
MSH6-206ENST00000455383 GTSF1LQ9H1H1 148 aa12.34□□□□□ -0.43
MSH6-206ENST00000455383 UBR4Q5T4S7 5183 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 PGPA6NDG6 321 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 F6UZH7 168 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 TAS2R45P59539 299 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 ATP5SQ99766 215 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 TREM1Q9NP99 234 aa12.33□□□□□ -0.44
MSH6-206ENST00000455383 KRTAP10-4P60372 401 aaPredicted RBP12.32□□□□□ -0.44
MSH6-206ENST00000455383 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 FFAR4Q5NUL3 377 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 SERTAD4-AS1Q5TG53 156 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 Q8N3U1 123 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 CMTM2Q8TAZ6 248 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 PTH2Q96A98 100 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 NMES1Q9C002 83 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 MBD2Q9UBB5 411 aa12.32□□□□□ -0.44
MSH6-206ENST00000455383 TRAV8-1A0A0A6YYK1 113 aa12.31□□□□□ -0.44
MSH6-206ENST00000455383 SIX6O95475 246 aa12.31□□□□□ -0.44
MSH6-206ENST00000455383 FAM74A1Q5RGS3 127 aa12.31□□□□□ -0.44
MSH6-206ENST00000455383 C9orf85Q96MD7 179 aa12.31□□□□□ -0.44
MSH6-206ENST00000455383 C11orf21Q9P2W6 132 aa12.31□□□□□ -0.44
MSH6-206ENST00000455383 FAM240BA0A1B0GVZ2 78 aa12.3□□□□□ -0.44
MSH6-206ENST00000455383 EIF3GO75821 320 aaKnown RBP eCLIP12.3□□□□□ -0.44
MSH6-206ENST00000455383 SCXQ7RTU7 201 aa12.3□□□□□ -0.44
MSH6-206ENST00000455383 CCDC32Q9BV29 185 aa12.3□□□□□ -0.44
MSH6-206ENST00000455383 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
MSH6-206ENST00000455383 TRAV8-3A0A0A6YYJ7 113 aa12.29□□□□□ -0.44
MSH6-206ENST00000455383 IGHV3-73A0A0B4J1V6 119 aa12.29□□□□□ -0.44
MSH6-206ENST00000455383 LINC00694P0DN24 101 aa12.29□□□□□ -0.44
MSH6-206ENST00000455383 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
MSH6-206ENST00000455383 LRRC37A5PQ49AS3 106 aa12.29□□□□□ -0.44
MSH6-206ENST00000455383 LECT2O14960 151 aa12.28□□□□□ -0.44
MSH6-206ENST00000455383 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
MSH6-206ENST00000455383 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
MSH6-206ENST00000455383 PKHD1L1Q86WI1 4243 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.27□□□□□ -0.45
MSH6-206ENST00000455383 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 GNG5P63218 68 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 ZNF506Q5JVG8 444 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 HSPB11Q9Y547 144 aa12.27□□□□□ -0.45
MSH6-206ENST00000455383 OXTP01178 125 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 CYCSP99999 105 aaKnown RBP12.26□□□□□ -0.45
MSH6-206ENST00000455383 ASAH1Q13510 395 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 LINC01620Q4KN68 170 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 TOR2AQ5JU69 321 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
MSH6-206ENST00000455383 BAALCQ8WXS3 180 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 SH3BGRL3Q9H299 93 aa12.26□□□□□ -0.45
MSH6-206ENST00000455383 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
MSH6-206ENST00000455383 SERTM2A0A1B0GWG4 89 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 TAAR5O14804 337 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
MSH6-206ENST00000455383 MZT2BQ6NZ67 158 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 SCGB1C1Q8TD33 95 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 SGK494Q96LW2 274 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
MSH6-206ENST00000455383 RNF222A6NCQ9 220 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms