RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 NUTF2P61970 127 aaKnown RBP3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 KHDC3LQ587J8 217 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF506Q5JVG8 444 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 LEMD1Q68G75 181 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 GPHB5Q86YW7 130 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 RXFP4Q8TDU9 374 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 RASL10AQ92737 203 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 FXYD5Q96DB9 178 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 FAM210BQ96KR6 192 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 PAXXQ9BUH6 204 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 EIF5A2Q9GZV4 153 aaKnown RBP3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 PARLQ9H300 379 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 SMDT1Q9H4I9 107 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 MANBALQ9NQG1 85 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMEM167BQ9NRX6 74 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMEM14CQ9P0S9 112 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 Q9UF83 564 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 RABAC1Q9UI14 185 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 VAX2Q9UIW0 290 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 PKD1L1Q8TDX9 2849 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 FBN1P35555 2871 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMEM218A2RU14 115 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 H3BQ15 152 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 K7EMT4 169 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF207O43670 478 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 SRP19P09132 144 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR10J4P0C629 311 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 NBEAP1P0C6P0 100 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 HIST1H1EP10412 219 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 S100A7P31151 101 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 UBE2L3P68036 154 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 MEF2BQ02080 365 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 COX19Q49B96 90 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 C1orf194Q5T5A4 169 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 UNQ9165/PRO28630Q6UXU0 137 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 C18orf65Q6ZTR6 163 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 MRPL55Q7Z7F7 128 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 MRPL52Q86TS9 123 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 BPIFA4PQ86YQ2 179 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR8I2Q8N0Y5 310 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR1N2Q8NGR9 330 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 C4orf3Q8WVX3 66 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMEM190Q8WZ59 177 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 LINC00052Q96N35 136 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 METTL26Q96S19 204 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 SLC35B3Q9H1N7 401 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 NIT2Q9NQR4 276 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 BIN3Q9NQY0 253 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 YTHDF2Q9Y5A9 579 aaKnown RBP3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 SMAD5-AS1Q9Y6J3 95 aa3.84□□□□□ -1.79
HMGB1P4-201ENST00000455362 IGHV3OR16-13A0A075B7E8 117 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV3-49A0A0A0MS15 119 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV7-4-1A0A0J9YVY3 117 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 A0A1W2PRE2 83 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 KRBOX1C9JBD0 128 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 C11orf94C9JXX5 98 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 LGALS9O00182 355 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 ORM1P02763 201 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 SFTA3P0C7M3 94 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 LINC00614P0C842 121 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGLC2P0DOY2 106 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 RPL7P18124 248 aaKnown RBP3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZP3P21754 424 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 MYCNOSP40205 109 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 SYNJ2BPP57105 145 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 DEFB136Q30KP8 78 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 CBLN2Q8IUK8 224 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 KLHL30-AS1Q8NEE0 82 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 BLNKQ8WV28 456 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 NARS2Q96I59 477 aaKnown RBP3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 GPR82Q96P67 336 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 TXNDC17Q9BRA2 123 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF586Q9NXT0 402 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 SMPXQ9UHP9 88 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 ZNF256Q9Y2P7 627 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 UFC1Q9Y3C8 167 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 ARL2-SNX15V9GYD0 113 aa3.83□□□□□ -1.8
HMGB1P4-201ENST00000455362 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGLV4-3A0A075B6K6 122 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 TRBV19A0A075B6N1 114 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 IGHV3-66A0A0C4DH42 116 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 PGPA6NDG6 321 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 A6NDN8 102 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 GGTLC3B5MD39 225 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 LINC01619G3V211 115 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 TMEM250H0YL14 139 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 PDE6DO43924 150 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 ATP5G3P48201 142 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 RANP62826 216 aaKnown RBP3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 LYPD1Q8N2G4 141 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 CYB561D1Q8N8Q1 229 aa3.82□□□□□ -1.8
HMGB1P4-201ENST00000455362 OR11H1Q8NG94 326 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms