RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 NHLRC2Q8NBF2 726 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 OCC1Q8TAD7 63 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 SMIM12Q96EX1 92 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 PYGO2Q9BRQ0 406 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 LINC00467Q9BRT7 94 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 U3KQK5 164 aa5.44□□□□□ -1.54
AC004540.1-206ENST00000448056 IGHV1OR15-1A0A075B7D0 117 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 IGHV4-28A0A0C4DH34 117 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 PGPEP1LA6NFU8 196 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 ZNF727A8MUV8 499 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 C9JCJ5 164 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 RRN3P1Q2M238 152 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 TDRG1Q3Y452 100 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 ANXA2RQ3ZCQ2 193 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 FAM74A3Q4VXF1 159 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 MUC21Q5SSG8 566 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 UQCC3Q6UW78 93 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 FAM159AQ6UWV7 190 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 Q8NAQ8 132 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 C11orf21Q9P2W6 132 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
AC004540.1-206ENST00000448056 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 A0A0J9YWU9 116 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 TMEM189A5PLL7 270 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 CBY3A6NI87 242 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 DEFB4AO15263 64 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 GNRH2O43555 120 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 SH2D1AO60880 128 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 MGST1P10620 155 aaKnown RBP5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 TMEM241Q24JQ0 296 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 SOHLH1Q5JUK2 328 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 ZNF493Q6ZR52 646 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 COMMD7Q86VX2 200 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 ZNF575Q86XF7 245 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 EIF4E3Q8N5X7 224 aaKnown RBP5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 SMIM7Q9BQ49 75 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 BIN3Q9NQY0 253 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 NAGKQ9UJ70 344 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 LY96Q9Y6Y9 160 aa5.42□□□□□ -1.54
AC004540.1-206ENST00000448056 IGKV3D-20A0A0C4DH25 116 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 PLAC8L1A1L4L8 177 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 KRBOX1C9JBD0 128 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 K7EN84 100 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 ORM1P02763 201 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 EMP1P54849 157 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 OR5I1Q13606 314 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 PRR27Q6MZM9 219 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 TMEM263Q8WUH6 116 aaKnown RBP5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 DAZAP1Q96EP5 407 aaKnown RBP5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 C16orf74Q96GX8 76 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 KCNS1Q96KK3 526 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 C11orf68Q9H3H3 251 aaKnown RBP5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 SDF2L1Q9HCN8 221 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 GSN-AS1Q9NRJ2 163 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 MDFICQ9P1T7 246 aa5.41□□□□□ -1.54
AC004540.1-206ENST00000448056 TRGV11A0A075B6L2 103 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 IGHV3-16A0A0C4DH30 117 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 TMEM218A2RU14 115 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 C19orf71A6NCJ1 209 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 B4DEV8 164 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 TYMSP04818 313 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 IBA57Q5T440 356 aaKnown RBP5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 LINC01551Q86U37 167 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 C11orf72Q8NBR9 251 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 NUDT10Q8NFP7 164 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 NUDT11Q96G61 164 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 EDA2RQ9HAV5 297 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 NAT8Q9UHE5 227 aa5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 TIMM8BQ9Y5J9 83 aaPredicted RBP5.4□□□□□ -1.54
AC004540.1-206ENST00000448056 M0R036 132 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 P01737 135 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 TCL1AP56279 114 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 RPL23P62829 140 aaKnown RBP5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 DAZ2Q13117 558 aaKnown RBP5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 DNLZQ5SXM8 178 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 FAM222AQ5U5X8 452 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 RNASE7Q9H1E1 156 aaKnown RBP5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 DKK2Q9UBU2 259 aa5.39□□□□□ -1.55
AC004540.1-206ENST00000448056 STAB2Q8WWQ8 2551 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 TMSB15BA0A087X1C1 80 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 GRIFINA4D1Z8 144 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 CXorf65A6NEN9 183 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 LYRM9A8MSI8 78 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 SNURFLB1AK76 121 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 RNASE3P12724 160 aaKnown RBP5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 ASIPP42127 132 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 ERVFC1-1P60608 527 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 RPL19P84098 196 aaKnown RBP5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 ZNF415Q09FC8 603 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 FAM231DQ6ZW35 169 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 OR2D3Q8NGH3 330 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 IL17DQ8TAD2 202 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
AC004540.1-206ENST00000448056 SPXQ9BT56 116 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms