RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 F6UB75 175 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 PRR30Q53SZ7 412 aaPredicted RBP8.12□□□□□ -1.11
LIN54-202ENST00000442461 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 VPREB3Q9UKI3 123 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 CNOT1A5YKK6 2376 aaKnown RBP8.12□□□□□ -1.11
LIN54-202ENST00000442461 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 ZNF833PQ6ZTB9 187 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 COX7CP15954 63 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 NDPQ00604 133 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 Q8TCH9 128 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 IGLV2-14P01704 120 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 IGLV3-19P01714 112 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 FAM27E3Q08E93 113 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 C17orf58Q2M2W7 97 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
LIN54-202ENST00000442461 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 C9orf106Q8NAJ2 232 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 RBAKDNA6NC62 111 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 LINC00322Q6ZN03 302 aaPredicted RBP8.11□□□□□ -1.11
LIN54-202ENST00000442461 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 SHANK3Q9BYB0 1731 aa8.11□□□□□ -1.11
LIN54-202ENST00000442461 COL6A6A6NMZ7 2263 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
LIN54-202ENST00000442461 HRCT1Q6UXD1 115 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 RPL36ALQ969Q0 106 aaKnown RBP8.1□□□□□ -1.11
LIN54-202ENST00000442461 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 P0C879 139 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 RHOHQ15669 191 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
LIN54-202ENST00000442461 PCNX2A6NKB5 2137 aa8.1□□□□□ -1.11
LIN54-202ENST00000442461 PATE3B3GLJ2 98 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 IGFBPL1Q8WX77 278 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
LIN54-202ENST00000442461 MGAMO43451 1857 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 PLXNA4Q9HCM2 1894 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 TRBV6-1A0A0K0K1D8 114 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
LIN54-202ENST00000442461 C1orf195Q5TG92 126 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 CFHR4Q92496 578 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 FGF23Q9GZV9 251 aaPredicted RBP8.09□□□□□ -1.11
LIN54-202ENST00000442461 OOSP1A8MZH6 123 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 H0YGX0 51 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 LY6EQ16553 131 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 C17orf82Q86X59 251 aaPredicted RBP8.09□□□□□ -1.11
LIN54-202ENST00000442461 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 RLFQ13129 1914 aa8.09□□□□□ -1.11
LIN54-202ENST00000442461 A0A0J9YXV3 536 aa8.09□□□□□ -1.12
LIN54-202ENST00000442461 BUB1B-PAK6H3BSN5 160 aa8.09□□□□□ -1.12
LIN54-202ENST00000442461 MALP21145 153 aa8.09□□□□□ -1.12
LIN54-202ENST00000442461 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.12
LIN54-202ENST00000442461 HELZP42694 1942 aaKnown RBP8.09□□□□□ -1.12
LIN54-202ENST00000442461 KIAA1549Q9HCM3 1950 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 CRLF1O75462 422 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 RNF152Q8N8N0 203 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 GATA3P23771 443 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 SERP2Q8N6R1 65 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 RPL39LQ96EH5 51 aaKnown RBP8.08□□□□□ -1.12
LIN54-202ENST00000442461 PROK2Q9HC23 129 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 P0DMU3 169 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 FAM231AP0DMU4 169 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 FAM231CP0DMU5 169 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 AGPAT4-IT1Q9H0P7 198 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
LIN54-202ENST00000442461 MALRD1Q5VYJ5 2156 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 TRBV7-1A0A0A6YYK4 115 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 UBE2E1P51965 193 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 DYNAPQ8N1N2 210 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 SLC25A29Q8N8R3 303 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 NRGNQ92686 78 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 TCF20Q9UGU0 1960 aaKnown RBP8.07□□□□□ -1.12
LIN54-202ENST00000442461 NACAE9PAV3 2078 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 FAM240AA0A1B0GVK7 77 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 DKK1O94907 266 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 CD59P13987 128 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 Q9H8V8 135 aa8.07□□□□□ -1.12
LIN54-202ENST00000442461 IGHV3-33P01772 117 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
LIN54-202ENST00000442461 BSPH1Q075Z2 132 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 TIMM17AQ99595 171 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 OBSL1O75147 1896 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 TMEM178BH3BS89 294 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 PFN2P35080 140 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 ITLN2Q8WWU7 325 aaPredicted RBP8.06□□□□□ -1.12
LIN54-202ENST00000442461 A0A0J9YY99 117 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 Q6ZPA2 131 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 C20orf173Q96LM9 149 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 U3KQE9 123 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
LIN54-202ENST00000442461 LINC01619G3V211 115 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms