RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 OR4K13Q8NH42 304 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 NEK7Q8TDX7 302 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 TESCQ96BS2 214 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 TLCD1Q96CP7 247 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 ZC2HC1AQ96GY0 325 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 SAMHD1Q9Y3Z3 626 aaKnown RBP1.36□□□□□ -2.19
HMGB3P12-201ENST00000438745 KMT2DO14686 5537 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 TRAV14DV4A0A0A6YYC5 116 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 TRAV1-1A0A0B4J248 108 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 TMEM30CPA0ZSE6 113 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 PGRMC1O00264 195 aaKnown RBP1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 SLC25A20O43772 301 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 E2F6O75461 281 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 HIST1H1BP16401 226 aaKnown RBP1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 PHBP35232 272 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 KCNJ3P48549 501 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 SULT1A2P50226 295 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 UBE2D1P51668 147 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 SNRPD3P62318 126 aaKnown RBP1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 EMX2Q04743 252 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 VMA21Q3ZAQ7 101 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 ZNF322Q6U7Q0 402 aaPredicted RBP1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 ZNF833PQ6ZTB9 187 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 NIT1Q86X76 327 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 TTC9CQ8N5M4 171 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 OR4D11Q8NGI4 311 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 OR2T4Q8NH00 348 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 GINS3Q9BRX5 216 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 OR51E2Q9H255 320 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 GPR84Q9NQS5 396 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 TRAPPC2LQ9UL33 140 aa1.35□□□□□ -2.19
HMGB3P12-201ENST00000438745 IGKV1-12A0A0C4DH73 117 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 TMEM269A0A1B0GVZ9 245 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 TMEM14DPA8MWL7 114 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 IBA57-AS1B1ANH7 110 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 B4DEV8 164 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 TMEM250H0YL14 139 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 M0QX08 132 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 AIPO00170 330 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 CYB5BO43169 146 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 CRXO43186 299 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 ORC5O43913 435 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 CREBL2O60519 120 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 HTN1P15515 57 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 HIST1H1CP16403 213 aaKnown RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 ATF1P18846 271 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 PSMA1P25786 263 aaKnown RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 RCVRNP35243 200 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 EIF2B2P49770 351 aaKnown RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 RBP2P50120 134 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 PSMD7P51665 324 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 GABARAPL2P60520 117 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 DR1Q01658 176 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 RSU1Q15404 277 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 MORN2Q502X0 79 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 Q56UQ5 140 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 RPL39P5Q59GN2 51 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 LYPD5Q6UWN5 251 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 MRPL52Q86TS9 123 aaKnown RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 STX19Q8N4C7 294 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 GPR32P1Q8NGA4 272 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 OR5D18Q8NGL1 313 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 OR9I1Q8NGQ6 314 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 ATP6V0E2Q8NHE4 81 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 THEM6Q8WUY1 208 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 RNF133Q8WVZ7 376 aa1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 GPX7Q96SL4 187 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 TIMM8BQ9Y5J9 83 aaPredicted RBP1.34□□□□□ -2.19
HMGB3P12-201ENST00000438745 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGSF23A1L1A6 192 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 EVPLLA8MZ36 301 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 CDC42EP2O14613 210 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 DCTN3O75935 186 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 ZNF682O95780 498 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 LTAP01374 205 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGHV3-33P01772 117 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 HBZP02008 142 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGKV1-16P04430 117 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 PRM2P04554 102 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGHV3-30-3P0DP02 117 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 HLA-DRB4P13762 266 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 NQO2P16083 231 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 SRIP30626 198 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 INPP1P49441 399 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 BLVRAP53004 296 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 DNAJB13P59910 316 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 MRPS15P82914 257 aaKnown RBP1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 TPRXLQ17RH7 258 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 C10orf55Q5SWW7 151 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 TMEM42Q69YG0 159 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 EBLN2Q6P2I7 272 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 COX6B2Q6YFQ2 88 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 TMEM167AQ8TBQ9 72 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 SUN5Q8TC36 379 aa1.33□□□□□ -2.2
HMGB3P12-201ENST00000438745 DTD1Q8TEA8 209 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms