RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 Q6ZSA8 131 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 OR5C1Q8NGR4 320 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 NUDT15Q9NV35 164 aa12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 LRP1Q07954 4544 aaKnown RBP12.16□□□□□ -0.46
UPK3BP1-201ENST00000428678 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 DIRC3C9JPN6 131 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 LYRM1O43325 122 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 HYLS1Q96M11 299 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
UPK3BP1-201ENST00000428678 LECT2O14960 151 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 PLA2G10O15496 165 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 LAGE3Q14657 143 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 LELP1Q5T871 98 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 SERTAD4-AS1Q5TG53 156 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 RBM38Q9H0Z9 239 aaKnown RBP12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
UPK3BP1-201ENST00000428678 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 TYMSP04818 313 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 RHOHQ15669 191 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 ATP5SQ99766 215 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 UBR4Q5T4S7 5183 aa12.13□□□□□ -0.47
UPK3BP1-201ENST00000428678 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.12□□□□□ -0.47
UPK3BP1-201ENST00000428678 F6UZH7 168 aa12.12□□□□□ -0.47
UPK3BP1-201ENST00000428678 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
UPK3BP1-201ENST00000428678 TRBV6-4A0A1B0GX49 114 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 H2AFB2P0C5Z0 115 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 LINC01620Q4KN68 170 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 KHDC3LQ587J8 217 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 GOLT1AQ6ZVE7 132 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 Q8N3U1 123 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 ATP6V0E2Q8NHE4 81 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 KCNS1Q96KK3 526 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 NMES1Q9C002 83 aa12.1□□□□□ -0.47
UPK3BP1-201ENST00000428678 PGPA6NDG6 321 aa12.09□□□□□ -0.47
UPK3BP1-201ENST00000428678 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
UPK3BP1-201ENST00000428678 SCXQ7RTU7 201 aa12.09□□□□□ -0.47
UPK3BP1-201ENST00000428678 TREM1Q9NP99 234 aa12.09□□□□□ -0.47
UPK3BP1-201ENST00000428678 OTORQ9NRC9 128 aa12.09□□□□□ -0.47
UPK3BP1-201ENST00000428678 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 RS1O15537 224 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 TAS2R45P59539 299 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 DPPA3Q6W0C5 159 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
UPK3BP1-201ENST00000428678 TRAV8-1A0A0A6YYK1 113 aa12.07□□□□□ -0.48
UPK3BP1-201ENST00000428678 CIDEAO60543 219 aa12.07□□□□□ -0.48
UPK3BP1-201ENST00000428678 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
UPK3BP1-201ENST00000428678 LRRC37A5PQ49AS3 106 aa12.07□□□□□ -0.48
UPK3BP1-201ENST00000428678 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
UPK3BP1-201ENST00000428678 FAT3Q8TDW7 4589 aa12.06□□□□□ -0.48
UPK3BP1-201ENST00000428678 SIX6O95475 246 aa12.06□□□□□ -0.48
UPK3BP1-201ENST00000428678 BAALCQ8WXS3 180 aa12.06□□□□□ -0.48
UPK3BP1-201ENST00000428678 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
UPK3BP1-201ENST00000428678 RBFOX3A6NFN3 312 aa12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 MGST1P10620 155 aaKnown RBP12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 TOR2AQ5JU69 321 aa12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 DAZ4Q86SG3 579 aaKnown RBP12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 DAZ3Q9NR90 486 aaKnown RBP12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 PLA2G2DQ9UNK4 145 aa12.05□□□□□ -0.48
UPK3BP1-201ENST00000428678 FAM240BA0A1B0GVZ2 78 aa12.04□□□□□ -0.48
UPK3BP1-201ENST00000428678 OXTP01178 125 aa12.04□□□□□ -0.48
UPK3BP1-201ENST00000428678 GNG5P63218 68 aa12.04□□□□□ -0.48
UPK3BP1-201ENST00000428678 CHAC1Q9BUX1 264 aa12.04□□□□□ -0.48
UPK3BP1-201ENST00000428678 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 H0YIZ8 118 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 KRTAP10-4P60372 401 aaPredicted RBP12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 ZNF506Q5JVG8 444 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 SGK494Q96LW2 274 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 NDFIP1Q9BT67 221 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 SH3BGRL3Q9H299 93 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 C11orf21Q9P2W6 132 aa12.03□□□□□ -0.48
UPK3BP1-201ENST00000428678 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 GAGE1Q13065 139 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 GAGE4Q13068 117 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 GAGE5Q13069 117 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 GAGE13Q4V321 117 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 ARL6IP6Q8N6S5 226 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 SCGB1C1Q8TD33 95 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 C9orf85Q96MD7 179 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 COX11Q9Y6N1 276 aa12.02□□□□□ -0.49
UPK3BP1-201ENST00000428678 ZNF80P51504 273 aaPredicted RBP12.01□□□□□ -0.49
UPK3BP1-201ENST00000428678 ASAH1Q13510 395 aa12.01□□□□□ -0.49
UPK3BP1-201ENST00000428678 Q8N976 141 aa12.01□□□□□ -0.49
UPK3BP1-201ENST00000428678 RMI2Q96E14 147 aa12.01□□□□□ -0.49
UPK3BP1-201ENST00000428678 TAAR5O14804 337 aa12□□□□□ -0.49
UPK3BP1-201ENST00000428678 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms