RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LY6G6EA0A0G2JKS1 128 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 INAFM1C9JVW0 142 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 H0Y9J4 135 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 IGHV4-38-2P0DP08 117 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 H2BFSP57053 126 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 LINC00311Q8N616 119 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 MLST8Q9BVC4 326 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
HERC4-206ENST00000427635 K7ERS5 55 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 LOXP28300 417 aaPredicted RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 NUP35Q8NFH5 326 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 FAM208BQ5VWN6 2430 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 NRXN2Q9P2S2 1712 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 CACNA1AO00555 2505 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 OTOGLQ3ZCN5 2332 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-9A0A0C4DH69 117 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 XGP55808 180 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 UBE2D3P61077 147 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 IL15RAQ13261 267 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 C14orf132Q9NPU4 83 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 ZFC3H1O60293 1989 aaKnown RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 SIPA1L3O60292 1781 aaPredicted RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 WNK3Q9BYP7 1800 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 DNAJC9-AS1A6NH13 148 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 H3BRN7 92 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 CTSGP08311 255 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 WT1P19544 449 aaPredicted RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
HERC4-206ENST00000427635 ZNF664Q8N3J9 261 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 ICE1Q9Y2F5 2266 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 FHL1Q13642 323 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 TRAV4A0A0B4J268 109 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 SHISA9B4DS77 424 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-16P04430 117 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 HRCT1Q6UXD1 115 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 SCN10AQ9Y5Y9 1956 aa4.52□□□□□ -1.69
HERC4-206ENST00000427635 ZNF462Q96JM2 2506 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PROP1O75360 226 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR31Q5SQ13 230 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 NPBQ8NG41 125 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 ESM1Q9NQ30 184 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-27A0A075B6S5 117 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.51□□□□□ -1.69
HERC4-206ENST00000427635 NDUFA7O95182 113 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 IGF1P05019 195 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR20EP86478 221 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR20CP86479 221 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR20DP86480 221 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR20BP86481 221 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR20AP86496 221 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PRR25Q96S07 402 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 SCN2AQ99250 2005 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-12A0A0C4DH73 117 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 LINC00473A8K010 186 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 IGKV1-6A0A0C4DH72 117 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 CRYGDP07320 174 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 DYNAPQ8N1N2 210 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 SVILO95425 2214 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 NMBP08949 121 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 C5orf38Q86SI9 138 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 WFDC9Q8NEX5 89 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 AGMATQ9BSE5 352 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 PIKFYVEQ9Y2I7 2098 aa4.51□□□□□ -1.69
HERC4-206ENST00000427635 IGHV4OR15-8A0A075B7B6 117 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 A0A087WW49 117 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 NTF4P34130 210 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 NDUFA4L2Q9NRX3 87 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 ZNF492Q9P255 531 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.5□□□□□ -1.69
HERC4-206ENST00000427635 A0A087WZ39 114 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 IGKV2-29A2NJV5 120 aaPredicted RBP4.5□□□□□ -1.69
HERC4-206ENST00000427635 NUPR2A6NF83 97 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 NCR3O14931 201 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 CXCL5P42830 114 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 A0A1B0GX51 115 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 ETV2O00321 342 aaPredicted RBP4.5□□□□□ -1.69
HERC4-206ENST00000427635 DEFB4AO15263 64 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 LINC00479Q96M42 142 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 ZNF706Q9Y5V0 76 aaPredicted RBP4.5□□□□□ -1.69
HERC4-206ENST00000427635 NCOR2Q9Y618 2525 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 DNAJC13O75165 2243 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 FASNP49327 2511 aaKnown RBP4.5□□□□□ -1.69
HERC4-206ENST00000427635 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 DEFB131BA0A096LNP1 70 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 IGKV2-24A0A0C4DH68 120 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 TICRRQ7Z2Z1 1910 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 IGLV3-9A0A075B6K5 115 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 TMEM14CQ9P0S9 112 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 ZNRD1Q9P1U0 126 aa4.5□□□□□ -1.69
HERC4-206ENST00000427635 RNF222A6NCQ9 220 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 IGHG2P01859 326 aa4.49□□□□□ -1.69
HERC4-206ENST00000427635 GATA1P15976 413 aaPredicted RBP4.49□□□□□ -1.69
HERC4-206ENST00000427635 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
HERC4-206ENST00000427635 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms