RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 NOTCH3Q9UM47 2321 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 IGKV1OR2-108A0A075B7D4 117 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 PRSS29PA6NIE9 313 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 GAGE2AQ6NT46 116 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 NPBQ8NG41 125 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 Q9HAA7 133 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 MUC6Q6W4X9 2439 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-207ENST00000426142 IGKV2-29A2NJV5 120 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-207ENST00000426142 C9JAW5 83 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 OCIAD2Q56VL3 154 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 ZNF48Q96MX3 618 aaPredicted RBP6.19□□□□□ -1.42
CTNND1-207ENST00000426142 SPRY4Q9C004 299 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 ESM1Q9NQ30 184 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 IGHV4OR15-8A0A075B7B6 117 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 A0A087WW49 117 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 GP9P14770 177 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 Q8NA96 180 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 Q8NFD4 153 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 IGKV2D-24A0A075B6R9 120 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 XCL1P47992 114 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 KLF12Q9Y4X4 402 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 MED13LQ71F56 2210 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 I3L2K1 104 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 C15orf53Q8NAA6 179 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
CTNND1-207ENST00000426142 MED13Q9UHV7 2174 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
CTNND1-207ENST00000426142 MORN5Q5VZ52 161 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 C5orf56Q8N8D9 126 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 K7EIM0 57 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 C9orf66Q5T8R8 295 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 Q8N9W7 124 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 SIGMAR1Q99720 223 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 TECTAO75443 2155 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 Q8N7P7 452 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 WIPF2Q8TF74 440 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-207ENST00000426142 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
CTNND1-207ENST00000426142 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-207ENST00000426142 MSMPQ1L6U9 139 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 Q6ZWC4 215 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 NDUFA12Q9UI09 145 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 DENND4AQ7Z401 1863 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 IGLV11-55A0A075B6I3 123 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 CTSGP08311 255 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 RHOHQ15669 191 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 DYSFO75923 2080 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 EML6Q6ZMW3 1958 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
CTNND1-207ENST00000426142 KLF5Q13887 457 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-207ENST00000426142 ADAMTSL5Q6ZMM2 481 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 DKK2Q9UBU2 259 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 DEFB4AO15263 64 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 DEFB1P60022 68 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 DAZAP2Q15038 168 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-207ENST00000426142 C11orf52Q96A22 123 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 C19orf84I3L1E1 186 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 TRAV25A0A0B4J276 109 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 IL15RAQ13261 267 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 SCRT2Q9NQ03 307 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 LTBP2Q14767 1821 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 BDP1A6H8Y1 2624 aa6.16□□□□□ -1.42
CTNND1-207ENST00000426142 RPL39LQ96EH5 51 aaKnown RBP6.16□□□□□ -1.42
CTNND1-207ENST00000426142 KLK5Q9Y337 293 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-207ENST00000426142 IGLV10-54A0A075B6I4 117 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 E7EUB6 86 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 PLA2G5P39877 138 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 RMI2Q96E14 147 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 SHANK1Q9Y566 2161 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 H3BMM0 161 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 IGKV1-17P01599 117 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 UBE2BP63146 152 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 PATE2Q6UY27 113 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 UBE2WQ96B02 151 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 DNAJC30Q96LL9 226 aa6.15□□□□□ -1.42
CTNND1-207ENST00000426142 IGHV3-30P01768 117 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 IGHV3-33P01772 117 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 IGHV3-30-3P0DP02 117 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 IGHV3-30-5P0DP03 117 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 CD5LO43866 347 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 GYPEP15421 78 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 HERVK_113P63121 156 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 GAGE2BQ13066 116 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 MAJINQ3KP22 176 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 FAM208BQ5VWN6 2430 aa6.15□□□□□ -1.43
CTNND1-207ENST00000426142 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 PRAC2D3DTV9 90 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 OBSL1O75147 1896 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 DLEU1O43261 78 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 ODF3L1Q8IXM7 274 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 C20orf78Q9BR46 151 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 SRCAPQ6ZRS2 3230 aa6.14□□□□□ -1.43
CTNND1-207ENST00000426142 TEX48A0A1B0GUV7 120 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms