RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
ACTB-204ENST00000425660 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 J3KRW8 73 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
ACTB-204ENST00000425660 KIAA1644Q3SXP7 199 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
ACTB-204ENST00000425660 WNK1Q9H4A3 2382 aa11.27□□□□□ -0.6
ACTB-204ENST00000425660 H3BMM0 161 aa11.27□□□□□ -0.61
ACTB-204ENST00000425660 SNAI2O43623 268 aa11.27□□□□□ -0.61
ACTB-204ENST00000425660 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
ACTB-204ENST00000425660 IGLV1-51P01701 117 aa11.27□□□□□ -0.61
ACTB-204ENST00000425660 SRIP30626 198 aa11.27□□□□□ -0.61
ACTB-204ENST00000425660 CDKN1BP46527 198 aa11.27□□□□□ -0.61
ACTB-204ENST00000425660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.61
ACTB-204ENST00000425660 C7orf71A4D174 169 aa11.26□□□□□ -0.61
ACTB-204ENST00000425660 NTF3P20783 257 aa11.26□□□□□ -0.61
ACTB-204ENST00000425660 TSPOP30536 169 aa11.26□□□□□ -0.61
ACTB-204ENST00000425660 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
ACTB-204ENST00000425660 ALKBH7Q9BT30 221 aaPredicted RBP11.26□□□□□ -0.61
ACTB-204ENST00000425660 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
ACTB-204ENST00000425660 ESDP10768 282 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 TDRG1Q3Y452 100 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 OR2K2Q8NGT1 345 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 SAP30O75446 220 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 MED14OSP0DP75 135 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 AKR1D1P51857 326 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 LINC00310P59036 64 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 ODF3L2Q3SX64 289 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 LINC00482Q8N8I6 264 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 CITED1Q99966 193 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 SORL1Q92673 2214 aa11.25□□□□□ -0.61
ACTB-204ENST00000425660 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 M0R2Z0 102 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 TWIST1Q15672 202 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 PDZD11Q5EBL8 140 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 HIST1H2BLQ99880 126 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 NAGKQ9UJ70 344 aa11.24□□□□□ -0.61
ACTB-204ENST00000425660 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 S100A2P29034 98 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 SPINK13Q1W4C9 94 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 TENM1Q9UKZ4 2725 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 PF4P02776 101 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 ASIPP42127 132 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 ZNF124Q15973 351 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
ACTB-204ENST00000425660 TRAV12-2A0A075B6T6 113 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 RBMY1BA6NDE4 496 aaKnown RBP11.22□□□□□ -0.61
ACTB-204ENST00000425660 RBMY1EA6NEQ0 496 aaKnown RBP11.22□□□□□ -0.61
ACTB-204ENST00000425660 NUPR1O60356 82 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 SERF1AO75920 110 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 RBMY1DP0C7P1 496 aaKnown RBP11.22□□□□□ -0.61
ACTB-204ENST00000425660 CACNG7P62955 275 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 PRR31Q5SQ13 230 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 FAM159AQ6UWV7 190 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
ACTB-204ENST00000425660 H3BVH4 76 aa11.21□□□□□ -0.61
ACTB-204ENST00000425660 CRXO43186 299 aaPredicted RBP11.21□□□□□ -0.61
ACTB-204ENST00000425660 AMBPP02760 352 aa11.21□□□□□ -0.61
ACTB-204ENST00000425660 RNASE3P12724 160 aaKnown RBP11.21□□□□□ -0.61
ACTB-204ENST00000425660 FABP4P15090 132 aa11.21□□□□□ -0.62
ACTB-204ENST00000425660 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.62
ACTB-204ENST00000425660 SSTP61278 116 aa11.21□□□□□ -0.62
ACTB-204ENST00000425660 BEAN1Q3B7T3 259 aa11.21□□□□□ -0.62
ACTB-204ENST00000425660 AMN1Q8IY45 258 aa11.21□□□□□ -0.62
ACTB-204ENST00000425660 U3KQK5 164 aa11.21□□□□□ -0.62
ACTB-204ENST00000425660 AGRNO00468 2067 aa11.2□□□□□ -0.62
ACTB-204ENST00000425660 OR11H12B2RN74 326 aa11.2□□□□□ -0.62
ACTB-204ENST00000425660 GNRH2O43555 120 aa11.2□□□□□ -0.62
ACTB-204ENST00000425660 S100A4P26447 101 aaKnown RBP11.2□□□□□ -0.62
ACTB-204ENST00000425660 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
ACTB-204ENST00000425660 RCHY1Q96PM5 261 aa11.2□□□□□ -0.62
ACTB-204ENST00000425660 SPANXN1Q5VSR9 72 aa11.19□□□□□ -0.62
ACTB-204ENST00000425660 TMEM18Q96B42 140 aa11.19□□□□□ -0.62
ACTB-204ENST00000425660 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
ACTB-204ENST00000425660 NXPH4O95158 308 aa11.19□□□□□ -0.62
ACTB-204ENST00000425660 LURAP1LQ8IV03 231 aa11.19□□□□□ -0.62
ACTB-204ENST00000425660 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
ACTB-204ENST00000425660 VWFP04275 2813 aa11.18□□□□□ -0.62
ACTB-204ENST00000425660 FBN1P35555 2871 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms