RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 RBAKDNA6NC62 111 aa8.79□□□□□ -1
UBR4-207ENST00000425413 CRXO43186 299 aaPredicted RBP8.79□□□□□ -1
UBR4-207ENST00000425413 PET117Q6UWS5 81 aa8.79□□□□□ -1
UBR4-207ENST00000425413 ZNF843Q8N446 348 aa8.79□□□□□ -1
UBR4-207ENST00000425413 GATD1Q8NB37 220 aa8.79□□□□□ -1
UBR4-207ENST00000425413 RNF185Q96GF1 192 aa8.79□□□□□ -1
UBR4-207ENST00000425413 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
UBR4-207ENST00000425413 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
UBR4-207ENST00000425413 C9orf139Q6ZV77 190 aa8.78□□□□□ -1
UBR4-207ENST00000425413 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
UBR4-207ENST00000425413 APCP25054 2843 aa8.78□□□□□ -1
UBR4-207ENST00000425413 IGKV3-20P01619 116 aa8.78□□□□□ -1
UBR4-207ENST00000425413 C9orf47Q6ZRZ4 202 aa8.78□□□□□ -1
UBR4-207ENST00000425413 BEX4Q9NWD9 120 aaPredicted RBP8.78□□□□□ -1
UBR4-207ENST00000425413 CBY3A6NI87 242 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 M0R381 172 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 CCL25O15444 150 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 VAMP3Q15836 100 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 COX11Q9Y6N1 276 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 CHD6Q8TD26 2715 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 ACANP16112 2415 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 A0A0G2JLM5 398 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 IGLV1-40P01703 118 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 SLC25A16P16260 332 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 U3KQK5 164 aa8.77□□□□□ -1.01
UBR4-207ENST00000425413 PSMG3-AS1Q96PY0 264 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 DAZ1Q9NQZ3 744 aaKnown RBP8.76□□□□□ -1.01
UBR4-207ENST00000425413 PEF1Q9UBV8 284 aaKnown RBP8.76□□□□□ -1.01
UBR4-207ENST00000425413 NF1P21359 2839 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 IGHV7-4-1A0A0J9YVY3 117 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 S100A4P26447 101 aaKnown RBP8.76□□□□□ -1.01
UBR4-207ENST00000425413 CACNG7P62955 275 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 DSCR9P59020 149 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 DEFB104AQ8WTQ1 72 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
UBR4-207ENST00000425413 HIST2H2BCQ6DN03 193 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 MAP1LC3AQ9H492 121 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 MTORP42345 2549 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 WNK1Q9H4A3 2382 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 A0A096LNT2 108 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 SOCS3O14543 225 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 GNRH2O43555 120 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
UBR4-207ENST00000425413 MRPL53Q96EL3 112 aaKnown RBP8.75□□□□□ -1.01
UBR4-207ENST00000425413 HBDP02042 147 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 ZNF688P0C7X2 276 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 ITPR3Q14573 2671 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 SMPXQ9UHP9 88 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 H3BUA1 57 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 GATA3P23771 443 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 LEPP41159 167 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 SYNJ2BPP57105 145 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 CFHR3Q02985 330 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
UBR4-207ENST00000425413 FLNAP21333 2647 aaKnown RBP8.73□□□□□ -1.01
UBR4-207ENST00000425413 HOXA3O43365 443 aaPredicted RBP8.73□□□□□ -1.01
UBR4-207ENST00000425413 PSMB8P28062 276 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 Q5PR19 223 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 BVES-AS1Q5T3Y7 98 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 ZNF469Q96JG9 3925 aaPredicted RBP8.73□□□□□ -1.01
UBR4-207ENST00000425413 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 ATP6V0BQ99437 205 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 CNFNQ9BYD5 112 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 AGRNO00468 2067 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 NOTCH3Q9UM47 2321 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 NBPF19A0A087WUL8 3843 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 SRSF2Q01130 221 aaKnown RBP8.73□□□□□ -1.01
UBR4-207ENST00000425413 DEFB136Q30KP8 78 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 ANKRD39Q53RE8 183 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 C14orf178Q8N769 122 aaPredicted RBP8.73□□□□□ -1.01
UBR4-207ENST00000425413 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 IFI27L1Q96BM0 104 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 LINC00477Q96M19 166 aa8.73□□□□□ -1.01
UBR4-207ENST00000425413 OVOL1O14753 267 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 IGHV4-31P0DP07 118 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 Q96MF0 132 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 DKK2Q9UBU2 259 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 MGPP08493 103 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 PSMG4Q5JS54 123 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 OR2K2Q8NGT1 345 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 MS4A6AQ9H2W1 248 aa8.72□□□□□ -1.01
UBR4-207ENST00000425413 TENM4Q6N022 2769 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 C12orf54Q6X4T0 127 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 C18orf65Q6ZTR6 163 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 TMEM158Q8WZ71 300 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 DUX3Q96PT4 197 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 PHLDA3Q9Y5J5 127 aa8.71□□□□□ -1.01
UBR4-207ENST00000425413 TRAV12-2A0A075B6T6 113 aa8.71□□□□□ -1.02
UBR4-207ENST00000425413 PPBPP02775 128 aa8.71□□□□□ -1.02
UBR4-207ENST00000425413 KHDC1LQ5JSQ8 128 aa8.71□□□□□ -1.02
UBR4-207ENST00000425413 NOTCH2Q04721 2471 aa8.71□□□□□ -1.02
UBR4-207ENST00000425413 TRAV12-3A0A0B4J271 114 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 TAX1BP3O14907 124 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 PRSS1P07477 247 aa8.7□□□□□ -1.02
UBR4-207ENST00000425413 COX8AP10176 69 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms