RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 MRAP2Q96G30 205 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 ANXA2RQ3ZCQ2 193 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 ZNF114Q8NC26 417 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
CMSS1-201ENST00000421999 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 A0A087WWC5 75 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 TMEM61Q8N0U2 210 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
CMSS1-201ENST00000421999 C5orf52A6NGY3 159 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.2
CMSS1-201ENST00000421999 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 DLX4Q92988 240 aaPredicted RBP7.54□□□□□ -1.2
CMSS1-201ENST00000421999 FANCD2OSQ96PS1 177 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 C11orf1Q9H5F2 150 aa7.54□□□□□ -1.2
CMSS1-201ENST00000421999 CRYGCP07315 174 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 ALKBH7Q9BT30 221 aaPredicted RBP7.53□□□□□ -1.2
CMSS1-201ENST00000421999 TMEM14CQ9P0S9 112 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 SMAD5-AS1Q9Y6J3 95 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 D6R8Y8 96 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 H3BRM9 83 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
CMSS1-201ENST00000421999 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 A0A096LPF7 62 aa7.53□□□□□ -1.2
CMSS1-201ENST00000421999 LOC102724200A0A096LPH7 203 aaPredicted RBP7.52□□□□□ -1.21
CMSS1-201ENST00000421999 VWC2LB2RUY7 222 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 BUB3O43684 328 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 UNQ9165/PRO28630Q6UXU0 137 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 NUP35Q8NFH5 326 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 FXYD5Q96DB9 178 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 AGPAT4-IT1Q9H0P7 198 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 CHD6Q8TD26 2715 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 RHODO00212 210 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 ORMDL2Q53FV1 153 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 PSMG3-AS1Q96PY0 264 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 A0A1B0GW64 132 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 IGHG4P01861 327 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 EBI3Q14213 229 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 GPHB5Q86YW7 130 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 TMEM75Q8N9X5 138 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
CMSS1-201ENST00000421999 PMCHL1Q16048 86 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 C10orf99Q6UWK7 81 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 C4orf3Q8WVX3 66 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 INS-IGF2F8WCM5 200 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 SMKR1H3BMG3 65 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
CMSS1-201ENST00000421999 CRYGBP07316 175 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 DEFB135Q30KP9 77 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 PATE2Q6UY27 113 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 ATP5L2Q7Z4Y8 100 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 LINC00614P0C842 121 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 ADCYAP1P18509 176 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 HOXA5P20719 270 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 CSTL1Q9H114 145 aa7.51□□□□□ -1.21
CMSS1-201ENST00000421999 MRPL16Q9NX20 251 aaKnown RBP7.51□□□□□ -1.21
CMSS1-201ENST00000421999 A0A0J9YY99 117 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 UBE2CO00762 179 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 SERF1AO75920 110 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 ADMP35318 185 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 RAB37Q96AX2 223 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 LOC400499M0QZD8 3231 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 VCYO14598 125 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 HBDP02042 147 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 LINC01006Q8NI28 216 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 HIST1H4GQ99525 98 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 TMEM213A2RRL7 107 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 HILS1P60008 231 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 DEFB1P60022 68 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 LY96Q9Y6Y9 160 aa7.5□□□□□ -1.21
CMSS1-201ENST00000421999 A8MWV9 139 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 INSL3P51460 131 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.49□□□□□ -1.21
CMSS1-201ENST00000421999 C11orf68Q9H3H3 251 aaKnown RBP7.49□□□□□ -1.21
CMSS1-201ENST00000421999 K7EMT4 169 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 IGF1P05019 195 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 DMRTA1Q5VZB9 504 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 C16orf54Q6UWD8 224 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 NDUFA11Q86Y39 141 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 MBD6Q96DN6 1003 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 PYGO2Q9BRQ0 406 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 GNB1LQ9BYB4 327 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
CMSS1-201ENST00000421999 ATMQ13315 3056 aa7.49□□□□□ -1.21
CMSS1-201ENST00000421999 DEFB4AO15263 64 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 PAX4O43316 350 aa7.48□□□□□ -1.21
CMSS1-201ENST00000421999 ASPHD1Q5U4P2 390 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms