RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 TEX50A0A1B0GTY4 177 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 LHBP01229 141 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 IGHV3-43DP0DP04 118 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 FAM216BQ8N7L0 139 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 BLNKQ8WV28 456 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 CCL13Q99616 98 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF492Q9P255 531 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 RNF7Q9UBF6 113 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 MED13LQ71F56 2210 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 C9JAW5 83 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 FGF6P10767 208 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 PSMG4Q5JS54 123 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 LINC00479Q96M42 142 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF714Q96N38 554 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 PAXXQ9BUH6 204 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 SLC25A2Q9BXI2 301 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 HIGD1AQ9Y241 93 aa7.27□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF256Q9Y2P7 627 aaPredicted RBP7.27□□□□□ -1.25
SNHG3-201ENST00000413987 ANKRD17O75179 2603 aaKnown RBP7.26□□□□□ -1.25
SNHG3-201ENST00000413987 PROP1O75360 226 aa7.26□□□□□ -1.25
SNHG3-201ENST00000413987 P01737 135 aa7.26□□□□□ -1.25
SNHG3-201ENST00000413987 RPL24P83731 157 aaKnown RBP7.26□□□□□ -1.25
SNHG3-201ENST00000413987 C2orf83Q53S99 150 aa7.26□□□□□ -1.25
SNHG3-201ENST00000413987 C11orf71Q6IPW1 123 aa7.26□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
SNHG3-201ENST00000413987 LYPD2Q6UXB3 125 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 OR4A5Q8NH83 315 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 RFESDQ8TAC1 157 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 CNTFRP26992 372 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 PRCDQ00LT1 54 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 TMEM30BQ3MIR4 351 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 LGALS9CQ6DKI2 356 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.25□□□□□ -1.25
SNHG3-201ENST00000413987 DDB2Q92466 427 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 EPDR1Q9UM22 224 aa7.25□□□□□ -1.25
SNHG3-201ENST00000413987 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 H7C1H1 209 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 COX7A2P2O60397 106 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 IGHV3-7P01780 117 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 PGLYRP4Q96LB8 373 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 C1QTNF4Q9BXJ3 329 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 IFI27L2Q9H2X8 130 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 IGKV1OR2-108A0A075B7D4 117 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 TRAV8-4A0A0B4J246 113 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 C19orf71A6NCJ1 209 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 LGALS1P09382 135 aaKnown RBP7.24□□□□□ -1.25
SNHG3-201ENST00000413987 C10orf113Q5VZT2 155 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 GAFA1Q96PS6 74 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 UNC79Q9P2D8 2635 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 NAV2Q8IVL1 2488 aa7.24□□□□□ -1.25
SNHG3-201ENST00000413987 ARHGAP32A7KAX9 2087 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 TANC2Q9HCD6 1990 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 F8W1H4 67 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 J3QKU1 62 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 AVPP01185 164 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 SLC25A5P05141 298 aaKnown RBP7.23□□□□□ -1.25
SNHG3-201ENST00000413987 MED14OSP0DP75 135 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 MYCNOSP40205 109 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 PRB3Q04118 309 aaPredicted RBP7.23□□□□□ -1.25
SNHG3-201ENST00000413987 RPL39P5Q59GN2 51 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 FOXI2Q6ZQN5 318 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 PDPNQ86YL7 162 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 GTSF1Q8WW33 167 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 TRAV5A0A0B4J249 113 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 TEX48A0A1B0GUV7 120 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 MGST3O14880 152 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 CT45A10P0DMU9 189 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 FAM106AQ4KMX7 169 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 TMEM219Q86XT9 240 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 OR9G1Q8NH87 305 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 PRSS3P2Q8NHM4 247 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 RAB37Q96AX2 223 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 HILPDAQ9Y5L2 63 aa7.23□□□□□ -1.25
SNHG3-201ENST00000413987 UPK2O00526 184 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 NDUFC2O95298 119 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 FAM106CPP0CH98 169 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF137PP52743 207 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 PPP1R27Q86WC6 154 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 TMEM190Q8WZ59 177 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 FXYD5Q96DB9 178 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 VGLL1Q99990 258 aa7.22□□□□□ -1.25
SNHG3-201ENST00000413987 LTAP01374 205 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 RBMY1CP0DJD4 496 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 PYYP10082 97 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 COX6B1P14854 86 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.251e-10■■□□□ 13
SNHG3-201ENST00000413987 ECSCRQ19T08 205 aa7.21□□□□□ -1.25
SNHG3-201ENST00000413987 ZNF788Q6ZQV5 615 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms