RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TFF1P04155 84 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1D-39P04432 117 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ATP5G1P05496 136 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 S100GP29377 79 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TSPOP30536 169 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ATP5G3P48201 142 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DIAPH2-AS1Q14236 149 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 HMGN3Q15651 99 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FAM162BQ5T6X4 162 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SFXN4Q6P4A7 337 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPL22L1Q6P5R6 122 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 AHSA2Q719I0 299 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DHFR2Q86XF0 187 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ACBD7Q8N6N7 88 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LINC00304Q8N9R0 145 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR10J5Q8NHC4 309 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ACOT12Q8WYK0 555 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LEAP2Q969E1 77 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SMIM12Q96EX1 92 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM56Q96MV1 263 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RTBDNQ9BSG5 229 aaPredicted RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 COMMD5Q9GZQ3 224 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CCDC90BQ9GZT6 254 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR51E2Q9H255 320 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SND1-IT1Q9HBX3 110 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SAR1AQ9NR31 198 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PLEKHJ1Q9NW61 149 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CMTM6Q9NX76 183 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SMPXQ9UHP9 88 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GNG8Q9UK08 70 aa1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RBM7Q9Y580 266 aaKnown RBP1.4□□□□□ -2.19
RNU6-1140P-201ENST00000410517 A0A1W2PQL4 384 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF705FA8MVS1 300 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF736B4DX44 427 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 K7EN84 100 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 M0QXV9 152 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 M0R2N4 97 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ATG12O94817 140 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 NAPSAO96009 420 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGHV3-7P01780 117 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 IGKV1-16P04430 117 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FABP1P07148 127 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF705DP0CH99 300 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 COX4I1P13073 169 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PVALBP20472 110 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 NPPCP23582 126 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CRHBPP24387 322 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GADD45AP24522 165 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PPP1CCP36873 323 aaKnown RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ETV6P41212 452 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RPL27AP46776 148 aaKnown RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DAD1P61803 113 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CATR1Q13166 79 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM241Q24JQ0 296 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RRN3P1Q2M238 152 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 C12orf74Q32Q52 190 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR10K2Q6IF99 312 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF705AQ6ZN79 300 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM136Q6ZRR5 245 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF664Q8N3J9 261 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GDPD1Q8N9F7 314 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR5D18Q8NGL1 313 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR4C16Q8NGL9 310 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR8D4Q8NGM9 314 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNRF2Q8NHG8 242 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TMEM167AQ8TBQ9 72 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CACNG8Q8WXS5 425 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 LSM10Q969L4 123 aaKnown RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ADAT3Q96EY9 351 aaPredicted RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 MRAP2Q96G30 205 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GINS4Q9BRT9 223 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SHANK2-AS3Q9BTD1 123 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 DCUN1D5Q9BTE7 237 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 FAM103A1Q9BTL3 118 aaKnown RBP1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 RHPN1-AS1Q9BWJ2 59 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GABARAPL1Q9H0R8 117 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TREM1Q9NP99 234 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ARMC1Q9NVT9 282 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 BET1LQ9NYM9 111 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TVP23BQ9NYZ1 205 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ZNF492Q9P255 531 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 ICOSQ9Y6W8 199 aa1.39□□□□□ -2.19
RNU6-1140P-201ENST00000410517 A6NIN4 97 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 OR4C45A6NMZ5 311 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 G3V2T6 193 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 H3BP45 60 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 BOLA2-SMG1P6H3BVE0 249 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SULT1C2O00338 296 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 GNG7O60262 68 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CRTAPO75718 401 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 SNAPC5O75971 98 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CRYZL1O95825 349 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CFDP00746 253 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 CTSDP07339 412 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TRAPPC2P0DI81 140 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 TRAPPC2BP0DI82 140 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 PSKH1P11801 424 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 MYL12AP19105 171 aa1.38□□□□□ -2.19
RNU6-1140P-201ENST00000410517 M6PRP20645 277 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms