RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 C20orf173Q96LM9 149 aa13.83□□□□□ -0.2
MBD1-208ENST00000398493 ZNF705DP0CH99 300 aaPredicted RBP13.83□□□□□ -0.2
MBD1-208ENST00000398493 ZNF705BP0CI00 300 aaPredicted RBP13.83□□□□□ -0.2
MBD1-208ENST00000398493 RAB4AP20338 218 aa13.83□□□□□ -0.2
MBD1-208ENST00000398493 TSSC4Q9Y5U2 329 aaPredicted RBP13.83□□□□□ -0.2
MBD1-208ENST00000398493 NSUN5P1Q3KNT7 163 aa13.82□□□□□ -0.2
MBD1-208ENST00000398493 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
MBD1-208ENST00000398493 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
MBD1-208ENST00000398493 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
MBD1-208ENST00000398493 C20orf144Q9BQM9 153 aa13.81□□□□□ -0.2
MBD1-208ENST00000398493 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 CTRLP40313 264 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 SHISA2Q6UWI4 295 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 MRPL52Q86TS9 123 aaKnown RBP13.8□□□□□ -0.2
MBD1-208ENST00000398493 IGHV4OR15-8A0A075B7B6 117 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 A0A087WW49 117 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 TMEM213A2RRL7 107 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 HSBP1O75506 76 aa13.8□□□□□ -0.2
MBD1-208ENST00000398493 TRBV7-9A0A0J9YWB2 115 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 M0QZ24 198 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 SYNJ2BPP57105 145 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 DEFB136Q30KP8 78 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 NDUFA11Q86Y39 141 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 OR8A1Q8NGG7 326 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 DUX3Q96PT4 197 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
MBD1-208ENST00000398493 PMCHP20382 165 aa13.78□□□□□ -0.2
MBD1-208ENST00000398493 HOXD3P31249 432 aaPredicted RBP13.78□□□□□ -0.2
MBD1-208ENST00000398493 TWIST1Q15672 202 aa13.78□□□□□ -0.2
MBD1-208ENST00000398493 NIT1Q86X76 327 aa13.78□□□□□ -0.2
MBD1-208ENST00000398493 CHCHD1Q96BP2 118 aaKnown RBP13.78□□□□□ -0.2
MBD1-208ENST00000398493 RNASEKQ6P5S7 137 aaKnown RBP13.78□□□□□ -0.2
MBD1-208ENST00000398493 VAMP8Q9BV40 100 aa13.78□□□□□ -0.2
MBD1-208ENST00000398493 WFDC3Q8IUB2 231 aa13.77□□□□□ -0.21
MBD1-208ENST00000398493 SPATA3Q8NHX4 192 aa13.77□□□□□ -0.21
MBD1-208ENST00000398493 C4orf3Q8WVX3 66 aa13.77□□□□□ -0.21
MBD1-208ENST00000398493 DPF1Q92782 380 aa13.77□□□□□ -0.21
MBD1-208ENST00000398493 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 NTF3P20783 257 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 KRTDAPP60985 99 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 SNRPD3P62318 126 aaKnown RBP13.76□□□□□ -0.21
MBD1-208ENST00000398493 FAM104BQ5XKR9 115 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 DCANP1Q8TF63 244 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 SSTP61278 116 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 C2orf88Q9BSF0 95 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 CNFNQ9BYD5 112 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 MS4A6AQ9H2W1 248 aa13.76□□□□□ -0.21
MBD1-208ENST00000398493 LINC01619G3V211 115 aa13.75□□□□□ -0.21
MBD1-208ENST00000398493 PMCHL1Q16048 86 aa13.75□□□□□ -0.21
MBD1-208ENST00000398493 PRR31Q5SQ13 230 aa13.75□□□□□ -0.21
MBD1-208ENST00000398493 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
MBD1-208ENST00000398493 C2orf70A6NJV1 201 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 M0R2Z0 102 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 LINC00614P0C842 121 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 EDN2P20800 178 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 ZNF575Q86XF7 245 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 OR11H1Q8NG94 326 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 TMEM191AQ9H0A3 160 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 PKD1L1Q8TDX9 2849 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 ZFAND2AQ8N6M9 145 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 PEMTQ9UBM1 199 aa13.74□□□□□ -0.21
MBD1-208ENST00000398493 MUC21A0A0G2JKD1 596 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 MUC21A0A140T8X8 626 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 OR5AL1P0C617 328 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 C3orf79P0CE67 100 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 MUC21Q5SSG8 566 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 SMIM15Q7Z3B0 74 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 FAM19A4Q96LR4 140 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 MIEN1Q9BRT3 115 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 C11orf21Q9P2W6 132 aa13.73□□□□□ -0.21
MBD1-208ENST00000398493 CACNG7P62955 275 aa13.72□□□□□ -0.21
MBD1-208ENST00000398493 ORMDL3Q8N138 153 aa13.72□□□□□ -0.21
MBD1-208ENST00000398493 Q8N976 141 aa13.72□□□□□ -0.21
MBD1-208ENST00000398493 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
MBD1-208ENST00000398493 SELENOKQ9Y6D0 94 aa13.72□□□□□ -0.21
MBD1-208ENST00000398493 F6UB75 175 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 K7EQG2 157 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 CD33P20138 364 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 TFPI2P48307 235 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 APRG1Q8IVJ8 170 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 AMN1Q8IY45 258 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 U3KQK5 164 aa13.71□□□□□ -0.21
MBD1-208ENST00000398493 C20orf202A1L168 122 aa13.71□□□□□ -0.22
MBD1-208ENST00000398493 J3KRW8 73 aa13.71□□□□□ -0.22
MBD1-208ENST00000398493 CCL24O00175 119 aa13.71□□□□□ -0.22
MBD1-208ENST00000398493 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.22
MBD1-208ENST00000398493 RNASE4P34096 147 aaKnown RBP13.71□□□□□ -0.22
MBD1-208ENST00000398493 PRELID3AQ96N28 172 aa13.71□□□□□ -0.22
MBD1-208ENST00000398493 PPBPP02775 128 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 CKS2P33552 79 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 SLURP1P55000 103 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 DEFB1P60022 68 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 FHL3Q13643 280 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 PSMG4Q5JS54 123 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 PRR9Q5T870 116 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
MBD1-208ENST00000398493 PRSS3P2Q8NHM4 247 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms