RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MLANAQ16655 118 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 FOXI2Q6ZQN5 318 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 C8orf86Q6ZUL3 223 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 CNTFRP26992 372 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 ECSCRQ19T08 205 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 M0R3E3 92 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 DNAL4O96015 105 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 FHL3Q13643 280 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 MORN5Q5VZ52 161 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 OR4X2Q8NGF9 303 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 HSPB9Q9BQS6 159 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 OR13C6PQ8NH95 151 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 LY6HO94772 140 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 RITA1Q96K30 269 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 C16orf95Q9H693 158 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 TCF21O43680 179 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 ZNF124Q15973 351 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 CD5LO43866 347 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 SRIP30626 198 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 CTAG1AP78358 180 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
PTPRD-206ENST00000397617 USP34Q70CQ2 3546 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 C1QTNF4Q9BXJ3 329 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 KLRD1Q13241 179 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 OR1N2Q8NGR9 330 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 SERF1AO75920 110 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 KIR2DL4Q99706 377 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 UBE2L6O14933 153 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 LEPP41159 167 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 ORAOV1Q8WV07 137 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 SPXQ9BT56 116 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 RHPN1-AS1Q9BWJ2 59 aa4.48□□□□□ -1.69
PTPRD-206ENST00000397617 RNASE1P07998 156 aaKnown RBP4.47□□□□□ -1.69
PTPRD-206ENST00000397617 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 ZC2HC1AQ96GY0 325 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 IGHV4-31P0DP07 118 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 LGALS9BQ3B8N2 356 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 SPANXN1Q5VSR9 72 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 LGALS9CQ6DKI2 356 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 SGK494Q96LW2 274 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 TRAV9-2A0A087WT02 112 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 HBDP02042 147 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 PF4V1P10720 104 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 SEC11AP67812 179 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 TMEM213A2RRL7 107 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 SIVA1O15304 175 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 LINC01545Q5VT33 79 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 LINC01619G3V211 115 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 TM4SF20Q53R12 229 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 RNASEKQ6P5S7 137 aaKnown RBP4.47□□□□□ -1.69
PTPRD-206ENST00000397617 OVOL2Q9BRP0 275 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 PPDPFQ9H3Y8 114 aa4.47□□□□□ -1.69
PTPRD-206ENST00000397617 WIPF1O43516 503 aa4.46□□□□□ -1.69
PTPRD-206ENST00000397617 ASIPP42127 132 aa4.46□□□□□ -1.69
PTPRD-206ENST00000397617 GTSF1Q8WW33 167 aa4.46□□□□□ -1.69
PTPRD-206ENST00000397617 C16orf92Q96LL3 132 aa4.46□□□□□ -1.69
PTPRD-206ENST00000397617 MAP1LC3AQ9H492 121 aa4.46□□□□□ -1.69
PTPRD-206ENST00000397617 A0A0J9YX75 114 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 SRSF1Q07955 248 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRD-206ENST00000397617 ZNF25P17030 456 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-206ENST00000397617 HILS1P60008 231 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 TRAV34A0A0B4J273 112 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 FAM181BA6NEQ2 426 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 C2orf70A6NJV1 201 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 EXOC3-AS1Q8N2X6 119 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 DCANP1Q8TF63 244 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 LINC00310P59036 64 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 RHOHQ15669 191 aa4.46□□□□□ -1.7
PTPRD-206ENST00000397617 FAM103A1Q9BTL3 118 aaKnown RBP4.46□□□□□ -1.7
PTPRD-206ENST00000397617 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 H3BRM9 83 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 TRAV12-1A0A0B4J245 112 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 SLAQ13239 276 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 CLEC19AQ6UXS0 136 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 C4orf3Q8WVX3 66 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 G3V318 75 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 S100A7L2Q5SY68 101 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 C17orf77Q96MU5 243 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 BBC3Q96PG8 261 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-206ENST00000397617 CRYBG3Q68DQ2 2970 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 CDKN1BP46527 198 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 TMEM101Q96IK0 257 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 A8MWV9 139 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 DEFB112Q30KQ8 113 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 LAMTOR3Q9UHA4 124 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 DNAH14Q0VDD8 3507 aa4.45□□□□□ -1.7
PTPRD-206ENST00000397617 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 HOXA3O43365 443 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms