RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 IGHV4-28A0A0C4DH34 117 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 F8W036 122 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 M0R036 132 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 RPL23P62829 140 aaKnown RBP17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 ADIRFQ15847 76 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 TDRG1Q3Y452 100 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 SDF2L1Q9HCN8 221 aa17.02■□□□□ 0.31
TSPAN4-203ENST00000397397 IGKV3D-20A0A0C4DH25 116 aa17.01■□□□□ 0.31
TSPAN4-203ENST00000397397 C19orf71A6NCJ1 209 aa17.01■□□□□ 0.31
TSPAN4-203ENST00000397397 B4DEV8 164 aa17.01■□□□□ 0.31
TSPAN4-203ENST00000397397 SLC7A5P1Q8MH63 180 aa17.01■□□□□ 0.31
TSPAN4-203ENST00000397397 Q8NAQ8 132 aa17.01■□□□□ 0.31
TSPAN4-203ENST00000397397 GNRH2O43555 120 aa17■□□□□ 0.31
TSPAN4-203ENST00000397397 ADCYAP1P18509 176 aa17■□□□□ 0.31
TSPAN4-203ENST00000397397 NDUFA5Q16718 116 aa17■□□□□ 0.31
TSPAN4-203ENST00000397397 LINC01559Q495D7 138 aa17■□□□□ 0.31
TSPAN4-203ENST00000397397 C16orf74Q96GX8 76 aa17■□□□□ 0.31
TSPAN4-203ENST00000397397 TRGV11A0A075B6L2 103 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 TMSB15BA0A087X1C1 80 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 KRBOX1C9JBD0 128 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 DEFB4AO15263 64 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 P01737 135 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 TYMSP04818 313 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 ZNF493Q6ZR52 646 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 NUDT10Q8NFP7 164 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 TMEM263Q8WUH6 116 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 NUDT11Q96G61 164 aa16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 RNASE7Q9H1E1 156 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-203ENST00000397397 TMEM189A5PLL7 270 aa16.98■□□□□ 0.31
TSPAN4-203ENST00000397397 RPL19P84098 196 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-203ENST00000397397 RNASE8Q8TDE3 154 aaKnown RBP16.98■□□□□ 0.31
TSPAN4-203ENST00000397397 SEC11CQ9BY50 192 aa16.98■□□□□ 0.31
TSPAN4-203ENST00000397397 EMP1P54849 157 aa16.97■□□□□ 0.31
TSPAN4-203ENST00000397397 ERVFC1-1P60608 527 aa16.97■□□□□ 0.31
TSPAN4-203ENST00000397397 IBA57Q5T440 356 aaKnown RBP16.97■□□□□ 0.31
TSPAN4-203ENST00000397397 ISOC2Q96AB3 205 aa16.97■□□□□ 0.31
TSPAN4-203ENST00000397397 OR2D3Q8NGH3 330 aa16.96■□□□□ 0.31
TSPAN4-203ENST00000397397 GRIFINA4D1Z8 144 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 ZNF415Q09FC8 603 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 FAM231DQ6ZW35 169 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 C11orf72Q8NBR9 251 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 GSN-AS1Q9NRJ2 163 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 MDFICQ9P1T7 246 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 U3KQK5 164 aa16.96■□□□□ 0.3
TSPAN4-203ENST00000397397 IGHV3-16A0A0C4DH30 117 aa16.95■□□□□ 0.3
TSPAN4-203ENST00000397397 A0A0J9YWU9 116 aa16.95■□□□□ 0.3
TSPAN4-203ENST00000397397 GATCO43716 136 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-203ENST00000397397 PNRC1Q12796 327 aaPredicted RBP16.95■□□□□ 0.3
TSPAN4-203ENST00000397397 C11orf68Q9H3H3 251 aaKnown RBP16.95■□□□□ 0.3
TSPAN4-203ENST00000397397 PLAC8L1A1L4L8 177 aa16.94■□□□□ 0.3
TSPAN4-203ENST00000397397 SNURFLB1AK76 121 aa16.94■□□□□ 0.3
TSPAN4-203ENST00000397397 ASIPP42127 132 aa16.94■□□□□ 0.3
TSPAN4-203ENST00000397397 RPP21Q9H633 154 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-203ENST00000397397 OSTCQ9NRP0 149 aa16.94■□□□□ 0.3
TSPAN4-203ENST00000397397 TENM3Q9P273 2699 aa16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 S100A4P26447 101 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 RPS20P60866 119 aaKnown RBP16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 C10orf91Q5T1B1 145 aa16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 C15orf54Q8N8G6 183 aa16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 SFRP2Q96HF1 295 aa16.93■□□□□ 0.3
TSPAN4-203ENST00000397397 TCL1AP56279 114 aa16.92■□□□□ 0.3
TSPAN4-203ENST00000397397 ZNF575Q86XF7 245 aa16.92■□□□□ 0.3
TSPAN4-203ENST00000397397 TIMM8BQ9Y5J9 83 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-203ENST00000397397 OR10G8Q8NGN5 311 aa16.91■□□□□ 0.3
TSPAN4-203ENST00000397397 NOP10Q9NPE3 64 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-203ENST00000397397 CARHSP1Q9Y2V2 147 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-203ENST00000397397 XKRY2A2RUG3 117 aa16.9■□□□□ 0.3
TSPAN4-203ENST00000397397 CXCL1P09341 107 aa16.9■□□□□ 0.3
TSPAN4-203ENST00000397397 GZMBP10144 247 aa16.9■□□□□ 0.3
TSPAN4-203ENST00000397397 DNLZQ5SXM8 178 aa16.9■□□□□ 0.3
TSPAN4-203ENST00000397397 IL17DQ8TAD2 202 aa16.9■□□□□ 0.3
TSPAN4-203ENST00000397397 H3BVH4 76 aa16.89■□□□□ 0.29
TSPAN4-203ENST00000397397 RNASE3P12724 160 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-203ENST00000397397 COL7A1Q02388 2944 aa16.89■□□□□ 0.29
TSPAN4-203ENST00000397397 DAZ2Q13117 558 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-203ENST00000397397 FAM222AQ5U5X8 452 aa16.88■□□□□ 0.29
TSPAN4-203ENST00000397397 C9orf85Q96MD7 179 aa16.88■□□□□ 0.29
TSPAN4-203ENST00000397397 SPXQ9BT56 116 aa16.88■□□□□ 0.29
TSPAN4-203ENST00000397397 ARMS2P0C7Q2 107 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 IL36BQ9NZH7 164 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 DKK2Q9UBU2 259 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 CELA1Q9UNI1 258 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 V9GYV3 84 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 LYRM9A8MSI8 78 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 A8MWL6 223 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 SPART-AS1P0CW21 52 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 CT83Q5H943 113 aa16.87■□□□□ 0.29
TSPAN4-203ENST00000397397 CXorf65A6NEN9 183 aa16.86■□□□□ 0.29
TSPAN4-203ENST00000397397 TRGV1A0A0A0MS02 117 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 SPINK4O60575 86 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 APOC3P02656 99 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 MED14OSP0DP75 135 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 RNF212Q495C1 297 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 TPPP3Q9BW30 176 aa16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 MRPL16Q9NX20 251 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-203ENST00000397397 TEX48A0A1B0GUV7 120 aa16.84■□□□□ 0.29
TSPAN4-203ENST00000397397 M0R2P5 195 aa16.84■□□□□ 0.29
TSPAN4-203ENST00000397397 PPP1R2P9O14990 202 aa16.84■□□□□ 0.29
TSPAN4-203ENST00000397397 MT-ND4LP03901 98 aa16.84■□□□□ 0.29
TSPAN4-203ENST00000397397 FER1L6-AS1Q8NA97 138 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms