RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 HIST1H1EP10412 219 aaKnown RBP6.2□□□□□ -1.42
NEDD9-203ENST00000397378 CAMLGP49069 296 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 PPT1P50897 306 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 RAB31Q13636 194 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 ZNF846Q147U1 533 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 SMIM15Q7Z3B0 74 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 NRARPQ7Z6K4 114 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 TOMM5Q8N4H5 51 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 MCFD2Q8NI22 146 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 RAB2BQ8WUD1 216 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
NEDD9-203ENST00000397378 C2orf88Q9BSF0 95 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 CHAC1Q9BUX1 264 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 BIN3Q9NQY0 253 aa6.2□□□□□ -1.42
NEDD9-203ENST00000397378 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-203ENST00000397378 LOC100131303A0A0U1RQF7 123 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 C9orf170A2RU37 121 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-203ENST00000397378 TNFSF8P32971 234 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 LELP1Q5T871 98 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 MIC13Q5XKP0 118 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 NHLRC2Q8NBF2 726 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 DYNC2LI1Q8TCX1 351 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 TIMM9Q9Y5J7 89 aa6.19□□□□□ -1.42
NEDD9-203ENST00000397378 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-203ENST00000397378 C7orf66A4D0T2 115 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 CENPXA8MT69 81 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 PFN1P07737 140 aaKnown RBP6.18□□□□□ -1.42
NEDD9-203ENST00000397378 H2AFB2P0C5Z0 115 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 SMIM18P0DKX4 95 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 TAGLN2P37802 199 aaKnown RBP6.18□□□□□ -1.42
NEDD9-203ENST00000397378 RPL29P47914 159 aaKnown RBP6.18□□□□□ -1.42
NEDD9-203ENST00000397378 ZNF138P52744 262 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 GAGE1Q13065 139 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 ZNF266Q14584 549 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 ACOT6Q3I5F7 207 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-203ENST00000397378 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 TOR2AQ5JU69 321 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 MUC21Q5SSG8 566 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 OR4C5Q8NGB2 326 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 S100ZQ8WXG8 99 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 WDR83OSQ9Y284 106 aa6.18□□□□□ -1.42
NEDD9-203ENST00000397378 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 TCAPO15273 167 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 IGHV3-33P01772 117 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 PYYP10082 97 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-203ENST00000397378 TMEM183BQ1AE95 376 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 IAH1Q2TAA2 248 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-203ENST00000397378 DNLZQ5SXM8 178 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 Q6AWC8 147 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 TMEM183AQ8IXX5 376 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 SLIRPQ9GZT3 109 aaKnown RBP6.17□□□□□ -1.42
NEDD9-203ENST00000397378 SLC39A9Q9NUM3 307 aa6.17□□□□□ -1.42
NEDD9-203ENST00000397378 TRAV8-3A0A0A6YYJ7 113 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 M0R2P5 195 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 MBPP02686 304 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-203ENST00000397378 VWC2Q2TAL6 325 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 FAM159AQ6UWV7 190 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 CLRN3Q8NCR9 226 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 Q8TAT8 98 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 MITD1Q8WV92 249 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 C20orf85Q9H1P6 137 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 UQCC1Q9NVA1 299 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 LENEPQ9Y5L5 61 aa6.16□□□□□ -1.42
NEDD9-203ENST00000397378 LECT2O14960 151 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 H2AFB1P0C5Y9 115 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 NBEAP1P0C6P0 100 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 G0S2P27469 103 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 BAK1Q16611 211 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 PYDC2Q56P42 97 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 Q6ZRU5 148 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 OR2D3Q8NGH3 330 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 GTSF1LQ9H1H1 148 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 GPN1Q9HCN4 374 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-203ENST00000397378 GSKIPQ9P0R6 139 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
NEDD9-203ENST00000397378 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 CST7O76096 145 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 NDUFB6O95139 128 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 RHOHQ15669 191 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 Q8N976 141 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 FAM167A-AS1Q96KT0 104 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 PRADC1Q9BSG0 188 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 SLC25A2Q9BXI2 301 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 DPH3P1Q9H4G8 78 aa6.14□□□□□ -1.43
NEDD9-203ENST00000397378 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
NEDD9-203ENST00000397378 UBE2L5PA0A1B0GUS4 154 aa6.13□□□□□ -1.43
NEDD9-203ENST00000397378 RNF222A6NCQ9 220 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms