RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 LINC01548A6NM66 108 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 J3QT63 122 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 CNTFRP26992 372 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 SYNJ2BPP57105 145 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 EEF1AKMT3Q96AZ1 226 aa6.7□□□□□ -1.34
NDE1-202ENST00000396355 TRAV17A0A0B4J275 112 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 SS18L1O75177 396 aaPredicted RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 RBM3P98179 157 aaKnown RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 MAPKAPK5-AS1Q8N8E1 139 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 MBD3L4A6NDZ8 208 aaPredicted RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 MBD3L3A6NE82 208 aaPredicted RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 DNAL4O96015 105 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 A0A087WX48 190 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 CECR9P0C854 216 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 CR1LQ2VPA4 569 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 ZNF329Q86UD4 541 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 MRPL32Q9BYC8 188 aaKnown RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 ITPR2Q14571 2701 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 IGKV3D-15A0A087WSY6 115 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 J3QLI3 93 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
NDE1-202ENST00000396355 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 FMC1Q96HJ9 113 aa6.69□□□□□ -1.34
NDE1-202ENST00000396355 SONP18583 2426 aaKnown RBP6.68□□□□□ -1.34
NDE1-202ENST00000396355 TIMM23O14925 209 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 Q6ZS49 121 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 URB1-AS1Q96HZ7 61 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 ZNF714Q96N38 554 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 HIGD1BQ9P298 99 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 RPUSD1Q9UJJ7 312 aaKnown RBP6.68□□□□□ -1.34
NDE1-202ENST00000396355 ACANP16112 2415 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 HAX1O00165 279 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 FOXF2Q12947 444 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 Q8TAT8 98 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 DYNLRB1Q9NP97 96 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 ADGRG4Q8IZF6 3080 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 TRAV26-2A0A0B4J265 109 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 MPV17P39210 176 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 IL17RELQ6ZVW7 336 aa6.68□□□□□ -1.34
NDE1-202ENST00000396355 C1orf195Q5TG92 126 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 ATP6V0E2Q8NHE4 81 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 M0R2P5 195 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 DUSP14O95147 198 aaKnown RBP6.67□□□□□ -1.34
NDE1-202ENST00000396355 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 Q8IYB0 196 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 WIPF2Q8TF74 440 aaPredicted RBP6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A18PA6NE21 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A16PA6NEW6 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A7PA6NKC0 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A22PA8MWA6 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A12PA8MX19 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A5PA8MXJ8 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A23PA8MXZ1 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 H7C1H1 209 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 UPK2O00526 184 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A15PP0C7V4 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A13PP0C7W8 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 FAM90A14PP0C7W9 464 aa6.67□□□□□ -1.34
NDE1-202ENST00000396355 TLN2Q9Y4G6 2542 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 TRAV21A0A0B4J279 112 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 FAM104BQ5XKR9 115 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 UQCRQO14949 82 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
NDE1-202ENST00000396355 TAL2Q16559 108 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 LINC00322Q6ZN03 302 aaPredicted RBP6.66□□□□□ -1.34
NDE1-202ENST00000396355 MPLKIPQ8TAP9 179 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 RNF125Q96EQ8 232 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 TRGV9Q99603 122 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 PLNP26678 52 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 LAGE3Q14657 143 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 WDR86Q86TI4 376 aa6.66□□□□□ -1.34
NDE1-202ENST00000396355 HTN1P15515 57 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 LINC01620Q4KN68 170 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 FAM74A4Q5TZK3 123 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 ZNRF1Q8ND25 227 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 ARHGAP32A7KAX9 2087 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 PMS2P5A8MQ11 134 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 TMEM75Q8N9X5 138 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 OTORQ9NRC9 128 aa6.65□□□□□ -1.34
NDE1-202ENST00000396355 IGHV3-49A0A0A0MS15 119 aa6.65□□□□□ -1.35
NDE1-202ENST00000396355 PSPNO60542 156 aa6.65□□□□□ -1.35
NDE1-202ENST00000396355 RNASE2P10153 161 aaKnown RBP6.65□□□□□ -1.35
NDE1-202ENST00000396355 FAM231DQ6ZW35 169 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms