RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ORM1P02763 201 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 NMBP08949 121 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 GIPP09681 153 aaPredicted RBP10.52□□□□□ -0.73
SNCA-205ENST00000394991 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
SNCA-205ENST00000394991 Q5BKY6 102 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 FAM167A-AS1Q96KT0 104 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 OR51M1Q9H341 326 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 Q9HAA7 133 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 PRELID1Q9Y255 219 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 OR10J4P0C629 311 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 PLA2G2DQ9UNK4 145 aa10.51□□□□□ -0.73
SNCA-205ENST00000394991 OR7C2O60412 319 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 NBEAP1P0C6P0 100 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 PDE6HQ13956 83 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 AAMDCQ9H7C9 122 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 ZNF492Q9P255 531 aa10.5□□□□□ -0.73
SNCA-205ENST00000394991 FXYD6-FXYD2A0A087WZ82 144 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 C9JCJ5 164 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 EIF3GO75821 320 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNCA-205ENST00000394991 TIRAPP58753 221 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 ACOT6Q3I5F7 207 aaPredicted RBP10.49□□□□□ -0.73
SNCA-205ENST00000394991 TMEM78Q5T7P6 136 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 Q8TAT8 98 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 ASB13Q8WXK3 278 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 RASL10AQ92737 203 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
SNCA-205ENST00000394991 A0A1W2PPV4 95 aa10.48□□□□□ -0.73
SNCA-205ENST00000394991 TAS2R45P59539 299 aa10.48□□□□□ -0.73
SNCA-205ENST00000394991 ZNF266Q14584 549 aa10.48□□□□□ -0.73
SNCA-205ENST00000394991 HSD17B11Q8NBQ5 300 aa10.48□□□□□ -0.73
SNCA-205ENST00000394991 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
SNCA-205ENST00000394991 OR2T35Q8NGX2 323 aa10.48□□□□□ -0.73
SNCA-205ENST00000394991 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 PPT1P50897 306 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 RAB2AP61019 212 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
SNCA-205ENST00000394991 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 SCXQ7RTU7 201 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 PHYHIPLQ96FC7 376 aa10.47□□□□□ -0.73
SNCA-205ENST00000394991 OXTP01178 125 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 IGHV3-30P01768 117 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 IGHV3-33P01772 117 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 ZNF138P52744 262 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
SNCA-205ENST00000394991 TMEM183BQ1AE95 376 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 TMEM183AQ8IXX5 376 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 SPXQ9BT56 116 aa10.46□□□□□ -0.73
SNCA-205ENST00000394991 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
SNCA-205ENST00000394991 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
SNCA-205ENST00000394991 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
SNCA-205ENST00000394991 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 RNF222A6NCQ9 220 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 LECT2O14960 151 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 HMGB3O15347 200 aaKnown RBP10.44□□□□□ -0.74
SNCA-205ENST00000394991 ATP6V0CP27449 155 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 CSN1S1P47710 185 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 OR4C5Q8NGB2 326 aa10.44□□□□□ -0.74
SNCA-205ENST00000394991 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.43□□□□□ -0.74
SNCA-205ENST00000394991 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
SNCA-205ENST00000394991 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
SNCA-205ENST00000394991 GATA1P15976 413 aaPredicted RBP10.43□□□□□ -0.74
SNCA-205ENST00000394991 OR10J3Q5JRS4 329 aa10.43□□□□□ -0.74
SNCA-205ENST00000394991 RPL7L1Q6DKI1 246 aaKnown RBP10.43□□□□□ -0.74
SNCA-205ENST00000394991 PSMG3Q9BT73 122 aaPredicted RBP10.43□□□□□ -0.74
SNCA-205ENST00000394991 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
SNCA-205ENST00000394991 TRGV11A0A075B6L2 103 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 SMLR1H3BR10 107 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 ARPC5O15511 151 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
SNCA-205ENST00000394991 Q6AWC8 147 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 Q8N3U1 123 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 OR2G3Q8NGZ4 309 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 HYLS1Q96M11 299 aa10.42□□□□□ -0.74
SNCA-205ENST00000394991 G3V3Q6 166 aa10.41□□□□□ -0.74
SNCA-205ENST00000394991 M0R2P5 195 aa10.41□□□□□ -0.74
SNCA-205ENST00000394991 LAGE3Q14657 143 aa10.41□□□□□ -0.74
SNCA-205ENST00000394991 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
SNCA-205ENST00000394991 RPH3ALQ9UNE2 315 aa10.41□□□□□ -0.74
SNCA-205ENST00000394991 PGPA6NDG6 321 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 MBP02144 154 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 SERF2P84101 59 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 FAM74A1Q5RGS3 127 aa10.4□□□□□ -0.74
SNCA-205ENST00000394991 LELP1Q5T871 98 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms