RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 SNCGO76070 127 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 CFDP00746 253 aaPredicted RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGKV1D-33P01593 117 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGKV1-33P01594 117 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV1-46P01743 117 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TRGV3P03979 118 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGLC2P0DOY2 106 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 IGLC3P0DOY3 106 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 SLC25A16P16260 332 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 CBLN1P23435 193 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 CIRBPQ14011 172 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MIAQ16674 131 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 ASB16-AS1Q495Z4 193 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 DPPA3Q6W0C5 159 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 ATP11AUNQ6ZP68 121 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 Q8N8P6 123 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 C15orf53Q8NAA6 179 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 Q8NDZ9 215 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 OR2T35Q8NGX2 323 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 VSTM2AQ8TAG5 236 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 SMCR5Q8TEV8 140 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TSKUQ8WUA8 353 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 S100A16Q96FQ6 103 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 GABARAPL1Q9H0R8 117 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TMEM242Q9NWH2 141 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TAS2R4Q9NYW5 299 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 PLXNA4Q9HCM2 1894 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TMEM131LA2VDJ0 1609 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 TRPM1Q7Z4N2 1603 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MED13Q9UHV7 2174 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MYH8P13535 1937 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 PLIN4Q96Q06 1357 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 MYH4Q9Y623 1939 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 PIK3C2AO00443 1686 aa1.07□□□□□ -2.24
TRAV40-201ENST00000390467 ZC3H13Q5T200 1668 aaKnown RBP1.07□□□□□ -2.24
TRAV40-201ENST00000390467 DAPK1P53355 1430 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 CASZ1Q86V15 1759 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 HEATR5BQ9P2D3 2071 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 FREM3P0C091 2139 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 COL11A1P12107 1806 aaPredicted RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 TRBV24-1A0A075B6N3 115 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 TRAV14DV4A0A0A6YYC5 116 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV3-15A0A0B4J1V0 119 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV3-73A0A0B4J1V6 119 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 TRBV7-7A0A0K0K1E9 115 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 UBE2L5PA0A1B0GUS4 154 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 MDFIC2A0A1B0GVS7 189 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 hADV29S1A0JD25 119 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 H3BMM0 161 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 LY6HO94772 140 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 NPYP01303 97 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 IGLV1-51P01701 117 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 IGKCP01834 107 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF705BP0CI00 300 aaPredicted RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SAA1P0DJI8 122 aaPredicted RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 PEBP1P30086 187 aaKnown RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SSR2P43308 183 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 HINT1P49773 126 aaPredicted RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 POLR2JP52435 117 aaKnown RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SUPT4H1P63272 117 aaKnown RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SEC11AP67812 179 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 UBE2L3P68036 154 aaKnown RBP1.06□□□□□ -2.24
TRAV40-201ENST00000390467 FUT5Q11128 374 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 INSL4Q14641 139 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 HEPN1Q6WQI6 88 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SDIM1Q6ZPB5 146 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 SLC25A26Q70HW3 274 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 C5orf38Q86SI9 138 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 Q8IYB0 196 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 DYNAPQ8N1N2 210 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 MYOZ3Q8TDC0 251 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 CLEC2BQ92478 149 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 AQP3Q92482 292 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 UBE2WQ96B02 151 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 IMMP2LQ96T52 175 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 AMELYQ99218 206 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 ST20Q9HBF5 79 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 CACFD1Q9UGQ2 172 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 RABAC1Q9UI14 185 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 LY96Q9Y6Y9 160 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 U3KQK5 164 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 GREB1Q4ZG55 1949 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 HFM1A2PYH4 1435 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 C10orf71Q711Q0 1435 aa1.06□□□□□ -2.24
TRAV40-201ENST00000390467 PXDNLA1KZ92 1463 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 MLH3Q9UHC1 1453 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 MAGI3Q5TCQ9 1506 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PTPRFP10586 1907 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PTPRDP23468 1912 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PTPRSQ13332 1948 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 KIF21AQ7Z4S6 1674 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ROBO1Q9Y6N7 1651 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 IGHV1-24A0A0C4DH33 117 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 A0A1W2PPM0 123 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 A0A1W2PQD3 144 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ZNF705FA8MVS1 300 aaPredicted RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 IBA57-AS1B1ANH7 110 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms