RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 TMEM190Q8WZ59 177 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 UBE2WQ96B02 151 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 MALRD1Q5VYJ5 2156 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 LINC01620Q4KN68 170 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 DYNAPQ8N1N2 210 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 TMEM105Q8N8V8 129 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 IGHV3-30P01768 117 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 LINC00694P0DN24 101 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 IGHV3-30-5P0DP03 117 aa14.64□□□□□ -0.07
SMARCD1-201ENST00000381513 POLEQ07864 2286 aa14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 COX6B1P14854 86 aa14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 GLRXP35754 106 aa14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 C1orf162Q8NEQ5 155 aaPredicted RBP14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 LOC107984640A0A0U1RRK4 108 aa14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 HES1Q14469 280 aa14.63□□□□□ -0.07
SMARCD1-201ENST00000381513 IGKV3D-20A0A0C4DH25 116 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 ATXN8Q156A1 80 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 MDFICQ9P1T7 246 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 C11orf86A6NJI1 115 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 C2orf82Q6UX34 121 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 TOMM6Q96B49 74 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 PRAC2D3DTV9 90 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 PMS2CLQ68D20 193 aa14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 CSDC2Q9Y534 153 aaKnown RBP14.62□□□□□ -0.07
SMARCD1-201ENST00000381513 TIMM23O14925 209 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 SUMO2P61956 95 aaKnown RBP14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 M0R381 172 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 NDUFB3O43676 98 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 GATA4P43694 442 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 C9orf153Q5TBE3 101 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 MDS2Q8NDY4 140 aa14.61□□□□□ -0.07
SMARCD1-201ENST00000381513 MGPP08493 103 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 GFRALQ6UXV0 394 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 RNF182Q8N6D2 247 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 CCL17Q92583 94 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 RPL39LQ96EH5 51 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 ELANEP08246 267 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 DUX3Q96PT4 197 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 SLC25A15Q9Y619 301 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 ATP1A1-AS1Q5TC04 95 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 UBTD1Q9HAC8 227 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 C11orf21Q9P2W6 132 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 CACNA1BQ00975 2339 aa14.6□□□□□ -0.07
SMARCD1-201ENST00000381513 IGHV3-33P01772 117 aa14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 DLX6P56179 175 aa14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 FAM236AA0A1B0GUQ0 79 aa14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 FAM236BA0A1B0GV22 79 aa14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 LGALS3P17931 250 aaKnown RBP14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 COX8CQ7Z4L0 72 aa14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 RAI1Q7Z5J4 1906 aaPredicted RBP14.59□□□□□ -0.07
SMARCD1-201ENST00000381513 LYPD2Q6UXB3 125 aa14.58□□□□□ -0.07
SMARCD1-201ENST00000381513 SLC25A29Q8N8R3 303 aa14.58□□□□□ -0.07
SMARCD1-201ENST00000381513 LINC01587Q99440 93 aa14.58□□□□□ -0.07
SMARCD1-201ENST00000381513 C5orf47Q569G3 176 aa14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 OOSP1A8MZH6 123 aa14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 LGALS9O00182 355 aa14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 DUSP14O95147 198 aaKnown RBP14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 COX7A1P24310 79 aa14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 NRGNQ92686 78 aa14.58□□□□□ -0.08
SMARCD1-201ENST00000381513 TSPEAR-AS2P59090 65 aa14.57□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV3-64A0A075B6Q5 118 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV3OR16-13A0A075B7E8 117 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV3-74A0A0B4J1X5 117 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 TRGV11A0A075B6L2 103 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV3-66A0A0C4DH42 116 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 PMVKQ15126 192 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 LINC00311Q8N616 119 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 C14orf178Q8N769 122 aaPredicted RBP14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 MFAP4P55083 255 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 DKK4Q9UBT3 224 aa14.56□□□□□ -0.08
SMARCD1-201ENST00000381513 KALRNO60229 2985 aa14.55□□□□□ -0.08
SMARCD1-201ENST00000381513 TRBV10-2A0A0K0K1G8 114 aa14.55□□□□□ -0.08
SMARCD1-201ENST00000381513 CRYGBP07316 175 aa14.55□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV1-8P0DP01 117 aa14.55□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV1-3A0A0C4DH29 117 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 SRSF2Q01130 221 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 TEX36Q5VZQ5 186 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHG4P01861 327 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 S100A4P26447 101 aaKnown RBP14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 PRSS33Q8NF86 280 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 DNAJC30Q96LL9 226 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 IGLV3-9A0A075B6K5 115 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 TMEM101Q96IK0 257 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 SLC50A1Q9BRV3 221 aa14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 KLK5Q9Y337 293 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-201ENST00000381513 J3QQQ9 107 aa14.53□□□□□ -0.08
SMARCD1-201ENST00000381513 MUSTN1Q8IVN3 82 aa14.53□□□□□ -0.08
SMARCD1-201ENST00000381513 ADIPOQQ15848 244 aa14.53□□□□□ -0.08
SMARCD1-201ENST00000381513 SMAD5-AS1Q9Y6J3 95 aa14.53□□□□□ -0.08
SMARCD1-201ENST00000381513 IGHV7-4-1A0A0J9YVY3 117 aa14.53□□□□□ -0.08
SMARCD1-201ENST00000381513 ARHGAP32A7KAX9 2087 aa14.52□□□□□ -0.08
SMARCD1-201ENST00000381513 NPFFO15130 113 aa14.52□□□□□ -0.08
SMARCD1-201ENST00000381513 PRSS2P07478 247 aa14.52□□□□□ -0.08
SMARCD1-201ENST00000381513 RPL13AP40429 203 aaKnown RBP14.52□□□□□ -0.08
SMARCD1-201ENST00000381513 CD3EP07766 207 aa14.52□□□□□ -0.09
SMARCD1-201ENST00000381513 TP53TG1Q9Y2A0 90 aa14.52□□□□□ -0.09
SMARCD1-201ENST00000381513 PAPPA-AS1Q5QFB9 102 aa14.51□□□□□ -0.09
SMARCD1-201ENST00000381513 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-201ENST00000381513 IGFBPL1Q8WX77 278 aa14.51□□□□□ -0.09
SMARCD1-201ENST00000381513 AGPAT4-IT1Q9H0P7 198 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms