RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 TRACP01848 142 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 HERVK_113P63121 156 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 CHD9Q3L8U1 2897 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 U3KQK5 164 aa8.58□□□□□ -1.04
USP6NL-202ENST00000379237 ZFHX2Q9C0A1 2572 aaPredicted RBP8.58□□□□□ -1.04
USP6NL-202ENST00000379237 IGKV3-7A0A075B6H7 116 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 THBDP07204 575 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
USP6NL-202ENST00000379237 C14orf178Q8N769 122 aaPredicted RBP8.57□□□□□ -1.04
USP6NL-202ENST00000379237 OOSP1A8MZH6 123 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 RS1O15537 224 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 K7EM74 188 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 DNAJC30Q96LL9 226 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 WDFY4Q6ZS81 3184 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 FAM74A4Q5TZK3 123 aa8.57□□□□□ -1.04
USP6NL-202ENST00000379237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 PTPRQQ9UMZ3 2332 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 IGLV2-11P01706 119 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 TRGV3P03979 118 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 Q0VFX4 171 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 PIMREGQ9BSJ6 248 aa8.56□□□□□ -1.04
USP6NL-202ENST00000379237 DUSP14O95147 198 aaKnown RBP8.56□□□□□ -1.04
USP6NL-202ENST00000379237 NHLRC4P0CG21 123 aaPredicted RBP8.56□□□□□ -1.04
USP6NL-202ENST00000379237 J3QQQ9 107 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 CDX4O14627 284 aaPredicted RBP8.55□□□□□ -1.04
USP6NL-202ENST00000379237 TIMM23O14925 209 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 PDE6HQ13956 83 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 DOPEY1Q5JWR5 2465 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 NDUFA7O95182 113 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 CNTFRP26992 372 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 TP53TG1Q9Y2A0 90 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 MRPS12O15235 138 aaKnown RBP8.55□□□□□ -1.04
USP6NL-202ENST00000379237 CRIP2P52943 208 aaPredicted RBP8.55□□□□□ -1.04
USP6NL-202ENST00000379237 C1orf43Q9BWL3 253 aa8.55□□□□□ -1.04
USP6NL-202ENST00000379237 TRAV41A0A0B4J266 112 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 H3BRN7 92 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 Q6Q795 121 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 SPRY2O43597 315 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 PPP1R17O96001 155 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
USP6NL-202ENST00000379237 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-202ENST00000379237 GAFA1Q96PS6 74 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 IGHG4P01861 327 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 UBE2D3P61077 147 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 UBE2D2P62837 147 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 ZNF474Q6S9Z5 364 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-202ENST00000379237 TMEM190Q8WZ59 177 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 NRGNQ92686 78 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 SIGLEC9Q9Y336 463 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 UQCRQO14949 82 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 MUSTN1Q8IVN3 82 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 FAM208BQ5VWN6 2430 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 MUC22E2RYF6 1773 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-202ENST00000379237 CUL9Q8IWT3 2517 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 IGHV1-18A0A0C4DH31 117 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 A0A0U1RRA0 63 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 PRR30Q53SZ7 412 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-202ENST00000379237 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
USP6NL-202ENST00000379237 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.04
USP6NL-202ENST00000379237 ADAMTS20P59510 1910 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 ADARB2-AS1A8MUL3 147 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 IGLC6P0CF74 106 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
USP6NL-202ENST00000379237 ZNF491Q8N8L2 437 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 BAALCQ8WXS3 180 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 RNF185Q96GF1 192 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 SPG11Q96JI7 2443 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 TMEM200BQ69YZ2 307 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 SAP25Q8TEE9 199 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 CFHR4Q92496 578 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 TRAV13-1A0A0B4J241 112 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 LGALS9O00182 355 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 UBE2D1P51668 147 aa8.52□□□□□ -1.05
USP6NL-202ENST00000379237 TRBV6-1A0A0K0K1D8 114 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 BRI3O95415 125 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 DNAL4O96015 105 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 IGKV1-17P01599 117 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 A0A0J9YY99 117 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 F5H768 121 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 ACACBO00763 2458 aa8.51□□□□□ -1.05
USP6NL-202ENST00000379237 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
USP6NL-202ENST00000379237 CITED2Q99967 270 aaPredicted RBP8.51□□□□□ -1.05
USP6NL-202ENST00000379237 SPRNQ5BIV9 151 aa8.5□□□□□ -1.05
USP6NL-202ENST00000379237 ECSCRQ19T08 205 aa8.5□□□□□ -1.05
USP6NL-202ENST00000379237 CLEC2BQ92478 149 aa8.5□□□□□ -1.05
USP6NL-202ENST00000379237 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
USP6NL-202ENST00000379237 RITA1Q96K30 269 aa8.5□□□□□ -1.05
USP6NL-202ENST00000379237 SPRR3Q9UBC9 169 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms