RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 S100A8P05109 93 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 EBLN2Q6P2I7 272 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 LINC00518Q8N0U6 118 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
THUMPD2-201ENST00000378727 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
THUMPD2-201ENST00000378727 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
THUMPD2-201ENST00000378727 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
THUMPD2-201ENST00000378727 ZNF493Q6ZR52 646 aa12.91□□□□□ -0.34
THUMPD2-201ENST00000378727 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
THUMPD2-201ENST00000378727 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 SERF1AO75920 110 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 IGKV3-20P01619 116 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 NTF3P20783 257 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 C18orf32Q8TCD1 76 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 SIGLEC8Q9NYZ4 499 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 NAGKQ9UJ70 344 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 F8P00451 2351 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 DEFB131AP59861 70 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
THUMPD2-201ENST00000378727 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 ZNF256Q9Y2P7 627 aaPredicted RBP12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 ESDP10768 282 aa12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 TWIST1Q15672 202 aa12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 IQCJQ1A5X6 159 aa12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
THUMPD2-201ENST00000378727 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 DUSP14O95147 198 aaKnown RBP12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 LEPP41159 167 aa12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 ZNF124Q15973 351 aa12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 AMTNQ6UX39 209 aa12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
THUMPD2-201ENST00000378727 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 M0R2Z0 102 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 NDUFA11Q86Y39 141 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 MAP6D1Q9H9H5 199 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 SNAI2O43623 268 aa12.87□□□□□ -0.35
THUMPD2-201ENST00000378727 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 C7orf71A4D174 169 aa12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 H3BVH4 76 aa12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
THUMPD2-201ENST00000378727 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 SPINK13Q1W4C9 94 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 FAM104BQ5XKR9 115 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 AMN1Q8IY45 258 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 C12orf57Q99622 126 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 A8MTW9 85 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 H3BMM0 161 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 GNRH2O43555 120 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 SMIM6P0DI80 62 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 CDKN1BP46527 198 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 TMEM18Q96B42 140 aa12.85□□□□□ -0.35
THUMPD2-201ENST00000378727 TMEM191AQ9H0A3 160 aa12.84□□□□□ -0.35
THUMPD2-201ENST00000378727 BAHCC1Q9P281 2608 aa12.84□□□□□ -0.35
THUMPD2-201ENST00000378727 PYY3Q5JQD4 70 aa12.84□□□□□ -0.35
THUMPD2-201ENST00000378727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
THUMPD2-201ENST00000378727 NIPBLQ6KC79 2804 aaeCLIP12.83□□□□□ -0.35
THUMPD2-201ENST00000378727 IGHV4-4A0A075B6R2 117 aa12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 SAP30O75446 220 aa12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 TSPOP30536 169 aa12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 ASIPP42127 132 aa12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 ODF3L2Q3SX64 289 aa12.83□□□□□ -0.36
THUMPD2-201ENST00000378727 SPRY2O43597 315 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 DNLZQ5SXM8 178 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 URB1-AS1Q96HZ7 61 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 KCNS1Q96KK3 526 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 CYSRT1A8MQ03 144 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 RNASE3P12724 160 aaKnown RBP12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 MRPL51Q4U2R6 128 aaKnown RBP12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 RNF185Q96GF1 192 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 U3KQK5 164 aa12.82□□□□□ -0.36
THUMPD2-201ENST00000378727 FXYD7P58549 80 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 TDRG1Q3Y452 100 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 FAM159AQ6UWV7 190 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 D6R8Y8 96 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 IGLV1-51P01701 117 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 CACNG7P62955 275 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
THUMPD2-201ENST00000378727 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
THUMPD2-201ENST00000378727 RAB4AP20338 218 aa12.8□□□□□ -0.36
THUMPD2-201ENST00000378727 EVI2AP22794 236 aa12.8□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1A1P0DJD3 496 aaKnown RBP12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1CP0DJD4 496 aa12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 RBMY1FQ15415 496 aaKnown RBP12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 NIT1Q86X76 327 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms