RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 AZU1P20160 251 aa13.72□□□□□ -0.21
GNE-201ENST00000377902 PSMG4Q5JS54 123 aa13.72□□□□□ -0.21
GNE-201ENST00000377902 METTL26Q96S19 204 aa13.72□□□□□ -0.21
GNE-201ENST00000377902 CYSLTR1Q9Y271 337 aa13.72□□□□□ -0.21
GNE-201ENST00000377902 SMAGPQ0VAQ4 97 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 MINOS1Q5TGZ0 78 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 C11orf71Q6IPW1 123 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 C16orf92Q96LL3 132 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 SIRPDQ9H106 197 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 MINOS1-NBL1R4GNA1 71 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 COL6A6A6NMZ7 2263 aa13.71□□□□□ -0.21
GNE-201ENST00000377902 PRSS47A8MTI9 375 aa13.71□□□□□ -0.22
GNE-201ENST00000377902 INSL3P51460 131 aa13.71□□□□□ -0.22
GNE-201ENST00000377902 C14orf178Q8N769 122 aaPredicted RBP13.71□□□□□ -0.22
GNE-201ENST00000377902 SAA4P35542 130 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 RAB9AP51151 201 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 C9orf47Q6ZRZ4 202 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 TMEM219Q86XT9 240 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 RASL10AQ92737 203 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 SCGB3A1Q96QR1 104 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 TRBV7-3A0A075B6L6 115 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 F8VRH5 84 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 PLNP26678 52 aa13.7□□□□□ -0.22
GNE-201ENST00000377902 CHTOPQ9Y3Y2 248 aaKnown RBP13.7□□□□□ -0.22
GNE-201ENST00000377902 A0A1W2PPR1 153 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 OOSP1A8MZH6 123 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 H7C1H1 209 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 SFTA2Q6UW10 78 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 HLA-DRB4P13762 266 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 HLA-DRB4X5D2U9 266 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 MUC6Q6W4X9 2439 aa13.69□□□□□ -0.22
GNE-201ENST00000377902 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 C1orf122Q6ZSJ8 110 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 EEF1AKMT3Q96AZ1 226 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
GNE-201ENST00000377902 HIF1ANQ9NWT6 349 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 MYMXA0A1B0GTQ4 84 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 F8W1H4 67 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 ADORA2A-AS1P86434 159 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 FOXC1Q12948 553 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
GNE-201ENST00000377902 MAP1AP78559 2803 aaPredicted RBP13.67□□□□□ -0.22
GNE-201ENST00000377902 IGKV3-7A0A075B6H7 116 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 TRBV12-3P01733 135 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 SUMO2P61956 95 aaKnown RBP13.67□□□□□ -0.22
GNE-201ENST00000377902 IGHV3OR16-10A0A075B7F0 116 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 OR11H12B2RN74 326 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 MGPP08493 103 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 FBXL19-AS1Q494R0 122 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 NEXN-AS1Q8NBZ9 246 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 OR11H1Q8NG94 326 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
GNE-201ENST00000377902 GAGE12HA6NDE8 117 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 F6UB75 175 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
GNE-201ENST00000377902 IGF2RP11717 2491 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 RNF223E7ERA6 249 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 EMP1P54849 157 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 TAL2Q16559 108 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 TOMM6Q96B49 74 aa13.66□□□□□ -0.22
GNE-201ENST00000377902 K7ENP7 123 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 GNRH2O43555 120 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
GNE-201ENST00000377902 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
GNE-201ENST00000377902 GPHB5Q86YW7 130 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 ZFAND2AQ8N6M9 145 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 PLEKHB2Q96CS7 222 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 MRAP2Q96G30 205 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 SIGMAR1Q99720 223 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 U3KQE9 123 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 GAGE13Q4V321 117 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 KLHL30-AS1Q8NEE0 82 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
GNE-201ENST00000377902 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 ANXA2RQ3ZCQ2 193 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 CD300EQ496F6 205 aaPredicted RBP13.64□□□□□ -0.23
GNE-201ENST00000377902 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 RAXQ9Y2V3 346 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 PRSS29PA6NIE9 313 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 UBE2E1P51965 193 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
GNE-201ENST00000377902 TRBV7-1A0A0A6YYK4 115 aa13.63□□□□□ -0.23
GNE-201ENST00000377902 ITLN2Q8WWU7 325 aaPredicted RBP13.63□□□□□ -0.23
GNE-201ENST00000377902 PHLDA3Q9Y5J5 127 aa13.63□□□□□ -0.23
GNE-201ENST00000377902 RNASE4P34096 147 aaKnown RBP13.63□□□□□ -0.23
GNE-201ENST00000377902 MRPL53Q96EL3 112 aaKnown RBP13.63□□□□□ -0.23
GNE-201ENST00000377902 PGPEP1Q9NXJ5 209 aa13.63□□□□□ -0.23
GNE-201ENST00000377902 SPTAN1Q13813 2472 aaKnown RBP13.62□□□□□ -0.23
GNE-201ENST00000377902 ORMDL2Q53FV1 153 aa13.62□□□□□ -0.23
GNE-201ENST00000377902 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
GNE-201ENST00000377902 SLC25A16P16260 332 aa13.62□□□□□ -0.23
GNE-201ENST00000377902 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
GNE-201ENST00000377902 SCGB2A2Q13296 93 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms