RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 RASL10AQ92737 203 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 MALRD1Q5VYJ5 2156 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 CNIH1O95406 144 aa12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 CRIP2P52943 208 aaPredicted RBP12.06□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGHV1-3A0A0C4DH29 117 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 IL17RELQ6ZVW7 336 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 OR11H6Q8NGC7 330 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 ROS1P08922 2347 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGFBPL1Q8WX77 278 aa12.05□□□□□ -0.48
CSNK1A1-202ENST00000377843 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 VCX2Q9H322 139 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 CHD8Q9HCK8 2581 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGHV3OR16-8A0A075B7F1 116 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE7O76087 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 CFC1BP0CG36 223 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 CFC1P0CG37 223 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE4Q13068 117 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 Q6ZS46 218 aa12.04□□□□□ -0.48
CSNK1A1-202ENST00000377843 TACC2O95359 2948 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 NDUFB3O43676 98 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 TMEM95Q3KNT9 176 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 BAALCQ8WXS3 180 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
CSNK1A1-202ENST00000377843 TMEM262E9PQX1 116 aa12.02□□□□□ -0.48
CSNK1A1-202ENST00000377843 FOXC1Q12948 553 aa12.02□□□□□ -0.48
CSNK1A1-202ENST00000377843 CCL17Q92583 94 aa12.02□□□□□ -0.48
CSNK1A1-202ENST00000377843 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.49
CSNK1A1-202ENST00000377843 TRAV8-2A0A0B4J237 113 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 IGLV1-47P01700 117 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 TRPT1Q86TN4 253 aaKnown RBP12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 RNF182Q8N6D2 247 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 TOMM6Q96B49 74 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 ADGRG4Q8IZF6 3080 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 A0A0J9YY99 117 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 SPRY2O43597 315 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 SLC25A20O43772 301 aa12.01□□□□□ -0.49
CSNK1A1-202ENST00000377843 EIF4EBP3O60516 100 aaPredicted RBP12□□□□□ -0.49
CSNK1A1-202ENST00000377843 RPL7P18124 248 aaKnown RBP12□□□□□ -0.49
CSNK1A1-202ENST00000377843 C3orf36Q3SXR2 165 aa12□□□□□ -0.49
CSNK1A1-202ENST00000377843 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 C9JAW5 83 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 BUB1B-PAK6H3BSN5 160 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 SNCGO76070 127 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 SCGB1C2P0DMR2 95 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 EMP1P54849 157 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 LYRM7Q5U5X0 104 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 FAM159AQ6UWV7 190 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 FANCD2OSQ96PS1 177 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 ONECUT1Q9UBC0 465 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 IFITM1P13164 125 aa11.99□□□□□ -0.49
CSNK1A1-202ENST00000377843 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 FAM27E3Q08E93 113 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 COX7A1P24310 79 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 MSRB2Q9Y3D2 182 aa11.98□□□□□ -0.49
CSNK1A1-202ENST00000377843 CRYGDP07320 174 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 ELANEP08246 267 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 RNF223E7ERA6 249 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
CSNK1A1-202ENST00000377843 C11orf86A6NJI1 115 aa11.96□□□□□ -0.49
CSNK1A1-202ENST00000377843 ASIPP42127 132 aa11.96□□□□□ -0.49
CSNK1A1-202ENST00000377843 ADIPOQQ15848 244 aa11.96□□□□□ -0.49
CSNK1A1-202ENST00000377843 Q8N1Y9 231 aa11.96□□□□□ -0.49
CSNK1A1-202ENST00000377843 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.49
CSNK1A1-202ENST00000377843 MBD3L4A6NDZ8 208 aaPredicted RBP11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 MBD3L3A6NE82 208 aaPredicted RBP11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 MBD3L5A6NJ08 208 aaPredicted RBP11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 MFAP4P55083 255 aa11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 MBD3L2Q8NHZ7 208 aaPredicted RBP11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.5
CSNK1A1-202ENST00000377843 TLN1Q9Y490 2541 aaKnown RBP11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGLV4-69A0A075B6H9 119 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 IGLV11-55A0A075B6I3 123 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 ORMDL2Q53FV1 153 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 PRO1854Q9UHT4 67 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 ATRXP46100 2492 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 SPTA1P02549 2419 aa11.95□□□□□ -0.5
CSNK1A1-202ENST00000377843 PKDREJQ9NTG1 2253 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms