RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ZNF705FA8MVS1 300 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 H3BMM0 161 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 HLA-DRB4P13762 266 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 CXCL2P19875 107 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 M6PRP20645 277 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 CDC34P49427 236 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 RHOBP62745 196 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 UBE2L3P68036 154 aaKnown RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 HIST1H1AQ02539 215 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 ACOT6Q3I5F7 207 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 LBHQ53QV2 105 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 KHDC3LQ587J8 217 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 SAMD13Q5VXD3 122 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 EBLN2Q6P2I7 272 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 FOXI2Q6ZQN5 318 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 Q6ZVQ6 151 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 COX8CQ7Z4L0 72 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 AKAP14Q86UN6 197 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 KIR2DL5AQ8N109 375 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 EXOC3-AS1Q8N2X6 119 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 KIR2DL5BQ8NHK3 375 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 PHYHIPLQ96FC7 376 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 SLC50A1Q9BRV3 221 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 ALKBH7Q9BT30 221 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 PSMG3Q9BT73 122 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 PAXXQ9BUH6 204 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 SLC35B3Q9H1N7 401 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 ZNF331Q9NQX6 463 aaPredicted RBP3.1□□□□□ -1.91
PMS1-202ENST00000374826 RPRMQ9NS64 109 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 XCL2Q9UBD3 114 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 RNF24Q9Y225 148 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 HLA-DRB4X5D2U9 266 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 TRBV19A0A075B6N1 114 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 A0A1W2PPV4 95 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 KANTRA0A1W2PQU2 76 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 HMSDA8MTL9 139 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 M0R2Z0 102 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 M0R3E3 92 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 TAAR5O14804 337 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 DEFB4AO15263 64 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 PFDN1O60925 122 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 GIG44P09565 113 aaPredicted RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 ARL14EPLP0DKL9 152 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 HIST1H1EP10412 219 aaKnown RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 SPP1P10451 314 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 CNN1P51911 297 aaKnown RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 TAS2R45P59539 299 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 ZNF345Q14585 488 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 PSG3Q16557 428 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 SPINK13Q1W4C9 94 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 TMEM41BQ5BJD5 291 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 AKR1C8PQ5T2L2 129 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 MORN3Q6PF18 240 aaPredicted RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 SSX7Q7RTT5 188 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 IQCF2Q8IXL9 164 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 BAP18Q8IXM2 172 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 KCNRGQ8N5I3 272 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR8A1Q8NGG7 326 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR10G4Q8NGN3 311 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR10G9Q8NGN4 311 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR2G3Q8NGZ4 309 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR11H2Q8NH07 326 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 FXYD5Q96DB9 178 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 ZNF471Q9BX82 626 aaPredicted RBP3.09□□□□□ -1.91
PMS1-202ENST00000374826 OR51M1Q9H341 326 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 CYTL1Q9NRR1 136 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 TMEM14CQ9P0S9 112 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 RPH3ALQ9UNE2 315 aa3.09□□□□□ -1.91
PMS1-202ENST00000374826 CSMD3Q7Z407 3707 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 TRAV12-2A0A075B6T6 113 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 IGHV3OR16-12A0A075B7B8 117 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 IGKV2-40A0A087WW87 121 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 A0A0D9SG52 128 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 A0A1B0GV50 99 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 RPL37AP8A6NKH3 93 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 ZNF253O75346 499 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 DUSP14O95147 198 aaKnown RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 IGKV2D-40P01614 121 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 C1QBP02746 253 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 NBEAP1P0C6P0 100 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 GCHFRP30047 84 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 NKX2-5P52952 324 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 FGF8P55075 233 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 NUTF2P61970 127 aaKnown RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 RANP62826 216 aaKnown RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 SERF2P84101 59 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 PSG9Q00887 426 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 PDE6HQ13956 83 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 ZNF726P1Q15940 193 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 GUK1Q16774 197 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 AMTNQ6UX39 209 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 RPP25LQ8N5L8 163 aaKnown RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 OR10J6PQ8NGY7 276 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 GNPNAT1Q96EK6 184 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 RARRES2Q99969 163 aa3.08□□□□□ -1.92
PMS1-202ENST00000374826 ACTR3CQ9C0K3 210 aaPredicted RBP3.08□□□□□ -1.92
PMS1-202ENST00000374826 Q9H3A6 140 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms