RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SMIM12Q96EX1 92 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 CELA1Q9UNI1 258 aa8.12□□□□□ -1.11
HSPG2-202ENST00000374676 TRGV11A0A075B6L2 103 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 SNURFLB1AK76 121 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 C9JCJ5 164 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 GNG4P50150 75 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 TCL1AP56279 114 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 NANOS2P60321 138 aaKnown RBP8.11□□□□□ -1.11
HSPG2-202ENST00000374676 PEA15Q15121 130 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 C12orf74Q32Q52 190 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 CENPWQ5EE01 88 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 SDF2L1Q9HCN8 221 aa8.11□□□□□ -1.11
HSPG2-202ENST00000374676 MUC4Q99102 2169 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 TRBV20OR9-2A0A075B6H5 130 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 C3orf84H3BNL1 204 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 GNRH2O43555 120 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 SH2D1AO60880 128 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 TYMSP04818 313 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 LINC00612Q8N6U2 182 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 NHLRC2Q8NBF2 726 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 PARLQ9H300 379 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 NOP10Q9NPE3 64 aaKnown RBP8.1□□□□□ -1.11
HSPG2-202ENST00000374676 BIN3Q9NQY0 253 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 GSN-AS1Q9NRJ2 163 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
HSPG2-202ENST00000374676 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 IGHV3-16A0A0C4DH30 117 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 ORM1P02763 201 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 SPXQ9BT56 116 aa8.09□□□□□ -1.11
HSPG2-202ENST00000374676 B4DEV8 164 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 KRBOX1C9JBD0 128 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 C9JQL5 133 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 SPINK4O60575 86 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 DAD1P61803 113 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 SRSF3P84103 164 aaKnown RBP8.08□□□□□ -1.12
HSPG2-202ENST00000374676 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 DNLZQ5SXM8 178 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 OCC1Q8TAD7 63 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 LY96Q9Y6Y9 160 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 STARD9Q9P2P6 4700 aa8.08□□□□□ -1.12
HSPG2-202ENST00000374676 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
HSPG2-202ENST00000374676 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
HSPG2-202ENST00000374676 PGPEP1LA6NFU8 196 aa8.07□□□□□ -1.12
HSPG2-202ENST00000374676 MGST1P10620 155 aaKnown RBP8.07□□□□□ -1.12
HSPG2-202ENST00000374676 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
HSPG2-202ENST00000374676 Q6ZTC4 211 aa8.07□□□□□ -1.12
HSPG2-202ENST00000374676 PHLDA1Q8WV24 401 aaPredicted RBP8.07□□□□□ -1.12
HSPG2-202ENST00000374676 SMIM7Q9BQ49 75 aa8.07□□□□□ -1.12
HSPG2-202ENST00000374676 TRAV10A0A0B4J240 114 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 ZNF727A8MUV8 499 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 M0R036 132 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 CXCL1P09341 107 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 DEFB130BP0DP73 79 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 DEFB130AP0DP74 79 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 CEBPGP53567 150 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 PRR27Q6MZM9 219 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
HSPG2-202ENST00000374676 Q6ZTI0 123 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 RASL10AQ92737 203 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 PTH2Q96A98 100 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
HSPG2-202ENST00000374676 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 C18orf15Q96N68 181 aa8.06□□□□□ -1.12
HSPG2-202ENST00000374676 TRGV1A0A0A0MS02 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 GAGE12BA1L429 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 K7EN84 100 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 M0R2P5 195 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 GAGE7O76087 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 GAGE12FP0CL80 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 GAGE12GP0CL81 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 GAGE12IP0CL82 117 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 RNASE3P12724 160 aaKnown RBP8.05□□□□□ -1.12
HSPG2-202ENST00000374676 S100A4P26447 101 aaKnown RBP8.05□□□□□ -1.12
HSPG2-202ENST00000374676 ASIPP42127 132 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 IL36BQ9NZH7 164 aa8.05□□□□□ -1.12
HSPG2-202ENST00000374676 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 DEFB131BA0A096LNP1 70 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 ATP5G1P05496 136 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 RPS20P60866 119 aaKnown RBP8.04□□□□□ -1.12
HSPG2-202ENST00000374676 OR5I1Q13606 314 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 TMEM241Q24JQ0 296 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 SOHLH1Q5JUK2 328 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 FAM231DQ6ZW35 169 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 NUDT10Q8NFP7 164 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 NUDT11Q96G61 164 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 NDUFAF3Q9BU61 184 aa8.04□□□□□ -1.12
HSPG2-202ENST00000374676 KLK5Q9Y337 293 aaPredicted RBP8.04□□□□□ -1.12
HSPG2-202ENST00000374676 TMSB15BA0A087X1C1 80 aa8.03□□□□□ -1.12
HSPG2-202ENST00000374676 P01737 135 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms