RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 STAB2Q8WWQ8 2551 aa10.73□□□□□ -0.69
HSPG2-201ENST00000374673 TRBV20OR9-2A0A075B6H5 130 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 IGLV2-8P01709 118 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 TYMSP04818 313 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 SRP19P09132 144 aaKnown RBP10.72□□□□□ -0.69
HSPG2-201ENST00000374673 GNG4P50150 75 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 TCL1AP56279 114 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 NANOS2P60321 138 aaKnown RBP10.72□□□□□ -0.69
HSPG2-201ENST00000374673 FAM162BQ5T6X4 162 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 SMDT1Q9H4I9 107 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
HSPG2-201ENST00000374673 C9JCJ5 164 aa10.71□□□□□ -0.69
HSPG2-201ENST00000374673 SH2D1AO60880 128 aa10.71□□□□□ -0.69
HSPG2-201ENST00000374673 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
HSPG2-201ENST00000374673 DAZ2Q13117 558 aaKnown RBP10.71□□□□□ -0.69
HSPG2-201ENST00000374673 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
HSPG2-201ENST00000374673 GSN-AS1Q9NRJ2 163 aa10.71□□□□□ -0.69
HSPG2-201ENST00000374673 IGKV3D-20A0A0C4DH25 116 aa10.7□□□□□ -0.7
HSPG2-201ENST00000374673 GNRH2O43555 120 aa10.7□□□□□ -0.7
HSPG2-201ENST00000374673 PEA15Q15121 130 aa10.7□□□□□ -0.7
HSPG2-201ENST00000374673 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
HSPG2-201ENST00000374673 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
HSPG2-201ENST00000374673 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
HSPG2-201ENST00000374673 C3orf84H3BNL1 204 aa10.69□□□□□ -0.7
HSPG2-201ENST00000374673 SRSF3P84103 164 aaKnown RBP10.69□□□□□ -0.7
HSPG2-201ENST00000374673 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
HSPG2-201ENST00000374673 MDFICQ9P1T7 246 aa10.69□□□□□ -0.7
HSPG2-201ENST00000374673 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 ORM1P02763 201 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
HSPG2-201ENST00000374673 CEBPGP53567 150 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 DAD1P61803 113 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 PRR27Q6MZM9 219 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 Q6ZTC4 211 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 SPXQ9BT56 116 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 BIN3Q9NQY0 253 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 DNAH7Q8WXX0 4024 aa10.68□□□□□ -0.7
HSPG2-201ENST00000374673 B4DEV8 164 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 KRBOX1C9JBD0 128 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 C9JQL5 133 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 SPINK4O60575 86 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 LGALS9BQ3B8N2 356 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 DNLZQ5SXM8 178 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
HSPG2-201ENST00000374673 SMIM7Q9BQ49 75 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
HSPG2-201ENST00000374673 C19orf71A6NCJ1 209 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 ZNF727A8MUV8 499 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 M0R036 132 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 DEFB130BP0DP73 79 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 DEFB130AP0DP74 79 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
HSPG2-201ENST00000374673 TRAV10A0A0B4J240 114 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 CXCL1P09341 107 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 RNASE3P12724 160 aaKnown RBP10.65□□□□□ -0.7
HSPG2-201ENST00000374673 ASIPP42127 132 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 FAM74A3Q4VXF1 159 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 ZFAND6Q6FIF0 208 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 Q6ZTI0 123 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 ZNF575Q86XF7 245 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 C18orf15Q96N68 181 aa10.65□□□□□ -0.7
HSPG2-201ENST00000374673 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 GAGE12BA1L429 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 K7EN84 100 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 GAGE7O76087 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 OR5I1Q13606 314 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 CASC10Q5T4H9 136 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-201ENST00000374673 RASL10AQ92737 203 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 DAZAP1Q96EP5 407 aaKnown RBP10.64□□□□□ -0.71
HSPG2-201ENST00000374673 IL36BQ9NZH7 164 aa10.64□□□□□ -0.71
HSPG2-201ENST00000374673 TMSB15BA0A087X1C1 80 aa10.63□□□□□ -0.71
HSPG2-201ENST00000374673 DEFB131BA0A096LNP1 70 aa10.63□□□□□ -0.71
HSPG2-201ENST00000374673 M0R2P5 195 aa10.63□□□□□ -0.71
HSPG2-201ENST00000374673 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
HSPG2-201ENST00000374673 RPL19P84098 196 aaKnown RBP10.63□□□□□ -0.71
HSPG2-201ENST00000374673 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
HSPG2-201ENST00000374673 MUC4Q99102 2169 aa10.63□□□□□ -0.71
HSPG2-201ENST00000374673 GRIFINA4D1Z8 144 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 P01737 135 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 ATP5G1P05496 136 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 PTH2Q96A98 100 aa10.62□□□□□ -0.71
HSPG2-201ENST00000374673 TRGV2A0A075B6R0 118 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 H3BVH4 76 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
HSPG2-201ENST00000374673 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 NUDT10Q8NFP7 164 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 NUDT11Q96G61 164 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 SCRT2Q9NQ03 307 aa10.61□□□□□ -0.71
HSPG2-201ENST00000374673 NAT8Q9UHE5 227 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1448.3 ms