RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 BRI3O95415 125 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 IGKV1-17P01599 117 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 TSPOP30536 169 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 KLK9Q2XQG4 91 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 TDRG1Q3Y452 100 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 GOLT1AQ6ZVE7 132 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 FA2HQ7L5A8 372 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 ZNF738Q8NE65 137 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 OR10AG1Q8NH19 301 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 PRSS3P2Q8NHM4 247 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 B9D2Q9BPU9 175 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 KLK9Q9UKQ9 250 aa7.91□□□□□ -1.14
COL5A1-202ENST00000371820 TMEM189A5PLL7 270 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 IGHV3-48P01763 117 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 PPBPP02775 128 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 GTSF1Q8WW33 167 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 USMG5Q96IX5 58 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 AP5S1Q9NUS5 200 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 C21orf62Q9NYP8 219 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 RABAC1Q9UI14 185 aa7.9□□□□□ -1.14
COL5A1-202ENST00000371820 IGLV11-55A0A075B6I3 123 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 A0A087WW49 117 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 IGLV2-11P01706 119 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 IGHV3-11P01762 117 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 IL4P05112 153 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 Q56UQ5 140 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 EBLN2Q6P2I7 272 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 SIGLEC15Q6ZMC9 328 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
COL5A1-202ENST00000371820 ZNF256Q9Y2P7 627 aaPredicted RBP7.89□□□□□ -1.15
COL5A1-202ENST00000371820 TNCP24821 2201 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 SAP30O75446 220 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 SLURP1P55000 103 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 BATFQ16520 125 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 DLX4Q92988 240 aaPredicted RBP7.88□□□□□ -1.15
COL5A1-202ENST00000371820 SLC50A1Q9BRV3 221 aa7.88□□□□□ -1.15
COL5A1-202ENST00000371820 SSBP4Q9BWG4 385 aaPredicted RBP7.88□□□□□ -1.15
COL5A1-202ENST00000371820 IGHV1-24A0A0C4DH33 117 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 FABP5P3A8MUU1 101 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 MRPS12O15235 138 aaKnown RBP7.87□□□□□ -1.15
COL5A1-202ENST00000371820 SIVA1O15304 175 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 APOHP02749 345 aaPredicted RBP7.87□□□□□ -1.15
COL5A1-202ENST00000371820 G0S2P27469 103 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 LINC00322Q6ZN03 302 aaPredicted RBP7.87□□□□□ -1.15
COL5A1-202ENST00000371820 ORMDL3Q8N138 153 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 EXOC3-AS1Q8N2X6 119 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
COL5A1-202ENST00000371820 ASCL2Q99929 193 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 U3KQK5 164 aa7.87□□□□□ -1.15
COL5A1-202ENST00000371820 A0A087X0K7 114 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 NHLRC4P0CG21 123 aaPredicted RBP7.86□□□□□ -1.15
COL5A1-202ENST00000371820 LINC01545Q5VT33 79 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 FAM104BQ5XKR9 115 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 SMIM15Q7Z3B0 74 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 ZC2HC1AQ96GY0 325 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 PRR25Q96S07 402 aa7.86□□□□□ -1.15
COL5A1-202ENST00000371820 PEF1Q9UBV8 284 aaKnown RBP7.86□□□□□ -1.15
COL5A1-202ENST00000371820 IGHV3-21A0A0B4J1V1 117 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 APELAP0DMC3 54 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 RHOGP84095 191 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
COL5A1-202ENST00000371820 RELQ04864 619 aaPredicted RBP7.85□□□□□ -1.15
COL5A1-202ENST00000371820 ATP5G2Q06055 141 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 UBE2V1Q13404 147 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 LGALS9BQ3B8N2 356 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 LEMD1Q68G75 181 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 LGALS9CQ6DKI2 356 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 URB1-AS1Q96HZ7 61 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 SGK494Q96LW2 274 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 COX11Q9Y6N1 276 aa7.85□□□□□ -1.15
COL5A1-202ENST00000371820 TRBV7-1A0A0A6YYK4 115 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 ZNF785A8K8V0 405 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 PRELID3AQ96N28 172 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 NXT2Q9NPJ8 142 aaKnown RBP7.84□□□□□ -1.15
COL5A1-202ENST00000371820 PEMTQ9UBM1 199 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 SMPXQ9UHP9 88 aa7.84□□□□□ -1.15
COL5A1-202ENST00000371820 STAB2Q8WWQ8 2551 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 ARMS2P0C7Q2 107 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 SEC11AP67812 179 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 LCN12Q6JVE5 192 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 STPG4Q8N801 248 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 FER1L6-AS1Q8NA97 138 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 OR9G4Q8NGQ1 327 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 EEF1AKMT3Q96AZ1 226 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
COL5A1-202ENST00000371820 TRAV8-1A0A0A6YYK1 113 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 SH2D1AO60880 128 aa7.82□□□□□ -1.16
COL5A1-202ENST00000371820 IGLV1-51P01701 117 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms