RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TGFAP01135 160 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 CTSGP08311 255 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 KLK15Q9H2R5 256 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV4-4A0A075B6R2 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 A0A0J9YY99 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 MUC4Q99102 2169 aa8.9□□□□□ -0.99
SMARCA1-201ENST00000371121 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 RHODO00212 210 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 IGF1P05019 195 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 SLC25A16P16260 332 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 KAAG1Q9UBP8 84 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF688P0C7X2 276 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 TDHQ8IZJ6 230 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 MYOZ3Q8TDC0 251 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 GAGE5Q13069 117 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 GAGE6Q13070 117 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 LOC107984156A0A0G2JMH3 177 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 NDUFB3O43676 98 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 ARL17AQ8IVW1 177 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 AGPAT4-IT1Q9H0P7 198 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CLPSL1A2RUU4 121 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 SMIM2Q9BVW6 85 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 IGHV3-35A0A0C4DH35 117 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 TIMM23O14925 209 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF815PA8K554 130 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 VKORC1Q9BQB6 163 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 TRBV20-1A0A075B6N2 111 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 RAXQ9Y2V3 346 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 VCX2Q9H322 139 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 PLGLAQ15195 96 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 CENPVL3A0A0U1RRI6 287 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 EMP1P54849 157 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 LYNX1G3V0Z9 82 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 LYNX1P0DP58 116 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 COX7A1P24310 79 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 ARRDC1-AS1Q9H2J1 176 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 BUB3O43684 328 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF883P0CG24 379 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 HERV-K104P63124 156 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 NPBQ8NG41 125 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 IGHV3-66A0A0C4DH42 116 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 CNIH1O95406 144 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 C10orf126Q8N4M7 172 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ONECUT1Q9UBC0 465 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 POLEQ07864 2286 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 RAB1BQ9H0U4 201 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 ANKRD11Q6UB99 2663 aaPredicted RBP8.83□□□□□ -1
SMARCA1-201ENST00000371121 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 IGIPA6NJ69 53 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
SMARCA1-201ENST00000371121 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 H3BVH4 76 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 NBR2O15453 112 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 PRTN3P24158 256 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 BDP1A6H8Y1 2624 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 MFAP4P55083 255 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 RNASE6Q93091 150 aaKnown RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 LINC01600Q96MT4 127 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 C21orf62Q9NYP8 219 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 RP1L1Q8IWN7 2480 aaPredicted RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 A8MWV9 139 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 LINC00315P59091 139 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 TEX29Q8N6K0 151 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 M0QXV9 152 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 C20orf173Q96LM9 149 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 CELSR2Q9HCU4 2923 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 SLC25A20O43772 301 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 DEFB1P60022 68 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 Q8N1Y9 231 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 RNF5Q99942 180 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms