RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 BAALCQ8WXS3 180 aa14.42□□□□□ -0.1
PRDM1-202ENST00000369091 SRSF2Q01130 221 aaKnown RBP14.42□□□□□ -0.1
PRDM1-202ENST00000369091 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV3-35A0A0C4DH35 117 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 RAX2Q96IS3 184 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 ZGRF1Q86YA3 2104 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 TMEM155Q4W5P6 130 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 C1orf122Q6ZSJ8 110 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 C3orf56Q8N813 242 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 TOMM6Q96B49 74 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV7-4-1A0A0J9YVY3 117 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 A0A0J9YY99 117 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 COX7A1P24310 79 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 NTN5Q8WTR8 489 aaPredicted RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 H7C2G1 150 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 RPL7P18124 248 aaKnown RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 ZNF672Q499Z4 452 aaPredicted RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 C10orf126Q8N4M7 172 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 DEFB104AQ8WTQ1 72 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 BOD1L1Q8NFC6 3051 aa14.38□□□□□ -0.11
PRDM1-202ENST00000369091 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
PRDM1-202ENST00000369091 SPANXN1Q5VSR9 72 aa14.38□□□□□ -0.11
PRDM1-202ENST00000369091 RPL39LQ96EH5 51 aaKnown RBP14.38□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TMEM178BH3BS89 294 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TECTAO75443 2155 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TSPEAR-AS2P59090 65 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TACC2O95359 2948 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 ASIPP42127 132 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 C2orf66Q6UXQ4 117 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 Q8N1Y9 231 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 RAB1BQ9H0U4 201 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 C11orf86A6NJI1 115 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 ELANEP08246 267 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 BUB1B-PAK6H3BSN5 160 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 EIF4EBP3O60516 100 aaPredicted RBP14.35□□□□□ -0.11
PRDM1-202ENST00000369091 ORMDL2Q53FV1 153 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 HIF1ANQ9NWT6 349 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 PRO1854Q9UHT4 67 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 TNFRSF18Q9Y5U5 241 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 CENPVL3A0A0U1RRI6 287 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 TEX49A0A1B0GTD5 131 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 SCGB2A1O75556 95 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 IGLV1-47P01700 117 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 FAM27E3Q08E93 113 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 C15orf53Q8NAA6 179 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 PKDREJQ9NTG1 2253 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 MFAP4P55083 255 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 FANCD2OSQ96PS1 177 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-66A0A0C4DH42 116 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 SUMO2P61956 95 aaKnown RBP14.33□□□□□ -0.11
PRDM1-202ENST00000369091 MEIG1Q5JSS6 88 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 FDCSPQ8NFU4 85 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 CRYGDP07320 174 aa14.32□□□□□ -0.12
PRDM1-202ENST00000369091 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
PRDM1-202ENST00000369091 DUSP14O95147 198 aaKnown RBP14.32□□□□□ -0.12
PRDM1-202ENST00000369091 CLEC3BP05452 202 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGLV4-69A0A075B6H9 119 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 TRAV8-4A0A0B4J246 113 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 TIMM23O14925 209 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV4-39P01824 125 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 CD59P13987 128 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 C21orf62Q9NYP8 219 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 ADIPOQQ15848 244 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 RNF223E7ERA6 249 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 J3KRW8 73 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 M0R381 172 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 C14orf178Q8N769 122 aaPredicted RBP14.3□□□□□ -0.12
PRDM1-202ENST00000369091 RP1L1Q8IWN7 2480 aaPredicted RBP14.29□□□□□ -0.12
PRDM1-202ENST00000369091 A4D1N5 150 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 CACNA1HO95180 2353 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 IGLV11-55A0A075B6I3 123 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 TCF15Q12870 199 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 SLC50A1Q9BRV3 221 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 PPDPFQ9H3Y8 114 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 ID1P41134 155 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 Q6Q795 121 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 SLC25A29Q8N8R3 303 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 TIMD4Q96H15 378 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 BEX4Q9NWD9 120 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 TSHBP01222 138 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3-33P01772 117 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MGPP08493 103 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 ARL3P36405 182 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 CHCHD5Q9BSY4 110 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 FAM57AQ8TBR7 257 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 VPREB3Q9UKI3 123 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 CTSGP08311 255 aa14.27□□□□□ -0.13
PRDM1-202ENST00000369091 HERVK_113P61574 105 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms