RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 BAALCQ8WXS3 180 aa14.42□□□□□ -0.1
PRDM1-202ENST00000369091 SRSF2Q01130 221 aaKnown RBP14.42□□□□□ -0.1
PRDM1-202ENST00000369091 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV3-35A0A0C4DH35 117 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 RAX2Q96IS3 184 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 ZGRF1Q86YA3 2104 aa14.41□□□□□ -0.1
PRDM1-202ENST00000369091 TMEM155Q4W5P6 130 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 C1orf122Q6ZSJ8 110 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 C3orf56Q8N813 242 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 TOMM6Q96B49 74 aa14.4□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV7-4-1A0A0J9YVY3 117 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 A0A0J9YY99 117 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 COX7A1P24310 79 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 NTN5Q8WTR8 489 aaPredicted RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 H7C2G1 150 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 RPL7P18124 248 aaKnown RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 ZNF672Q499Z4 452 aaPredicted RBP14.39□□□□□ -0.11
PRDM1-202ENST00000369091 C10orf126Q8N4M7 172 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 DEFB104AQ8WTQ1 72 aa14.39□□□□□ -0.11
PRDM1-202ENST00000369091 BOD1L1Q8NFC6 3051 aa14.38□□□□□ -0.11
PRDM1-202ENST00000369091 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
PRDM1-202ENST00000369091 SPANXN1Q5VSR9 72 aa14.38□□□□□ -0.11
PRDM1-202ENST00000369091 RPL39LQ96EH5 51 aaKnown RBP14.38□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-30P01768 117 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-30-5P0DP03 117 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TMEM178BH3BS89 294 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TECTAO75443 2155 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TSPEAR-AS2P59090 65 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 PIP4P1Q86T03 277 aa14.37□□□□□ -0.11
PRDM1-202ENST00000369091 TACC2O95359 2948 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 ASIPP42127 132 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 C2orf66Q6UXQ4 117 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 Q8N1Y9 231 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 ODF3Q96PU9 254 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 RAB1BQ9H0U4 201 aa14.36□□□□□ -0.11
PRDM1-202ENST00000369091 C11orf86A6NJI1 115 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 ELANEP08246 267 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 BUB1B-PAK6H3BSN5 160 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 EIF4EBP3O60516 100 aaPredicted RBP14.35□□□□□ -0.11
PRDM1-202ENST00000369091 ORMDL2Q53FV1 153 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 HIF1ANQ9NWT6 349 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 PRO1854Q9UHT4 67 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 TNFRSF18Q9Y5U5 241 aa14.35□□□□□ -0.11
PRDM1-202ENST00000369091 CENPVL3A0A0U1RRI6 287 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 TEX49A0A1B0GTD5 131 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 C17orf100A8MU93 164 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 SCGB2A1O75556 95 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 IGLV1-47P01700 117 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 FAM27E3Q08E93 113 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 C15orf53Q8NAA6 179 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 PKDREJQ9NTG1 2253 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 MFAP4P55083 255 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 FANCD2OSQ96PS1 177 aa14.34□□□□□ -0.11
PRDM1-202ENST00000369091 IGHV3-66A0A0C4DH42 116 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 SUMO2P61956 95 aaKnown RBP14.33□□□□□ -0.11
PRDM1-202ENST00000369091 MEIG1Q5JSS6 88 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 FDCSPQ8NFU4 85 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.11
PRDM1-202ENST00000369091 CRYGDP07320 174 aa14.32□□□□□ -0.12
PRDM1-202ENST00000369091 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
PRDM1-202ENST00000369091 DUSP14O95147 198 aaKnown RBP14.32□□□□□ -0.12
PRDM1-202ENST00000369091 CLEC3BP05452 202 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGLV4-69A0A075B6H9 119 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 TRAV8-4A0A0B4J246 113 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 TIMM23O14925 209 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV4-39P01824 125 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 CD59P13987 128 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 C21orf62Q9NYP8 219 aa14.31□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 ADIPOQQ15848 244 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 RNF223E7ERA6 249 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 J3KRW8 73 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 M0R381 172 aa14.3□□□□□ -0.12
PRDM1-202ENST00000369091 C14orf178Q8N769 122 aaPredicted RBP14.3□□□□□ -0.12
PRDM1-202ENST00000369091 RP1L1Q8IWN7 2480 aaPredicted RBP14.29□□□□□ -0.12
PRDM1-202ENST00000369091 A4D1N5 150 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 CACNA1HO95180 2353 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 IGLV11-55A0A075B6I3 123 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 TCF15Q12870 199 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 SLC50A1Q9BRV3 221 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 PPDPFQ9H3Y8 114 aa14.29□□□□□ -0.12
PRDM1-202ENST00000369091 ID1P41134 155 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 Q6Q795 121 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 SLC25A29Q8N8R3 303 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 TIMD4Q96H15 378 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 BEX4Q9NWD9 120 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L4A6NDZ8 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L3A6NE82 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L5A6NJ08 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 TSHBP01222 138 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 IGHV3-33P01772 117 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MGPP08493 103 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 ARL3P36405 182 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 MBD3L2Q8NHZ7 208 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-202ENST00000369091 CHCHD5Q9BSY4 110 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 FAM57AQ8TBR7 257 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 VPREB3Q9UKI3 123 aa14.28□□□□□ -0.12
PRDM1-202ENST00000369091 CTSGP08311 255 aa14.27□□□□□ -0.13
PRDM1-202ENST00000369091 HERVK_113P61574 105 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms