RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 C5orf56Q8N8D9 126 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 LY6LH3BQJ8 138 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 RRN3P1Q2M238 152 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 MLST8Q9BVC4 326 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 H7C1H1 209 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 LYRM7Q5U5X0 104 aa6.56□□□□□ -1.36
PTPRK-206ENST00000368215 MRPL16Q9NX20 251 aaKnown RBP6.56□□□□□ -1.36
PTPRK-206ENST00000368215 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 GNRH2O43555 120 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 TRBV12-3P01733 135 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 SPOCK3Q9BQ16 436 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 GEMIN7Q9H840 131 aaKnown RBP6.55□□□□□ -1.36
PTPRK-206ENST00000368215 POLQO75417 2590 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 LRRK2Q5S007 2527 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 TNFRSF13BO14836 293 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-206ENST00000368215 DEFB131AP59861 70 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 COX11Q9Y6N1 276 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 ESDP10768 282 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 SEC11AP67812 179 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 PCP4P48539 62 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 ZNF80P51504 273 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-206ENST00000368215 ZNF876PQ49A33 203 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 Q5PR19 223 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
PTPRK-206ENST00000368215 TNRC6BQ9UPQ9 1833 aaKnown RBP6.54□□□□□ -1.36
PTPRK-206ENST00000368215 IGHV7-4-1A0A0J9YVY3 117 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 A0A1B0GXF2 115 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
PTPRK-206ENST00000368215 C10orf105Q8TEF2 133 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 VCX2Q9H322 139 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 COL6A3P12111 3177 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 KIR3DS1Q14943 382 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 UNQ9165/PRO28630Q6UXU0 137 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 MRPL52Q86TS9 123 aaKnown RBP6.54□□□□□ -1.36
PTPRK-206ENST00000368215 Q8N8P6 123 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 SMPXQ9UHP9 88 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 RNF114Q9Y508 228 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 STHQ8IWL8 128 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 AJUBAQ96IF1 538 aa6.54□□□□□ -1.36
PTPRK-206ENST00000368215 MYCNOSP40205 109 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 C11orf71Q6IPW1 123 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 UBE2E2Q96LR5 201 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 PAPPA-AS1Q5QFB9 102 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 Q96MF0 132 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 MRPL35Q9NZE8 188 aaKnown RBP6.53□□□□□ -1.36
PTPRK-206ENST00000368215 TP73-AS1Q9UF72 201 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 FRYLO94915 3013 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 MYO15AQ9UKN7 3530 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 GATA3P23771 443 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 LOXL1Q08397 574 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-206ENST00000368215 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 UBE2L6O14933 153 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 COX8AP10176 69 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 DEFB136Q30KP8 78 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 LGALS9BQ3B8N2 356 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 LGALS9CQ6DKI2 356 aa6.53□□□□□ -1.36
PTPRK-206ENST00000368215 PF4P02776 101 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 TEX29Q8N6K0 151 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 ZNF418Q8TF45 676 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-206ENST00000368215 DSCAML1Q8TD84 2053 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 VCYO14598 125 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-206ENST00000368215 CRIP1P50238 77 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 SAMD5Q5TGI4 173 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 RAI1Q7Z5J4 1906 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-206ENST00000368215 C2orf70A6NJV1 201 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 CD5LO43866 347 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 CD28P10747 220 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 COTL1Q14019 142 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 ANKRD39Q53RE8 183 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 Q71RC1 249 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-206ENST00000368215 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 MRAP2Q96G30 205 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 SMIM2Q9BVW6 85 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 NSUN5P1Q3KNT7 163 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 TP53TG1Q9Y2A0 90 aa6.52□□□□□ -1.37
PTPRK-206ENST00000368215 ABCA12Q86UK0 2595 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 VWC2LB2RUY7 222 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 C19orf54Q5BKX5 351 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 C16orf54Q6UWD8 224 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 HIVEP2P31629 2446 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 A0A1W2PPR1 153 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 PLNP26678 52 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 LINC00310P59036 64 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 ZNF479Q96JC4 524 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
PTPRK-206ENST00000368215 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms