RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 APCP25054 2843 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 SMAGPQ0VAQ4 97 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 LINC01559Q495D7 138 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 ZNF575Q86XF7 245 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 PRSS1P07477 247 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 PIMREGQ9BSJ6 248 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 NXT2Q9NPJ8 142 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 CSMD2Q7Z408 3487 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 IGLL5B9A064 214 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 WFDC2Q14508 124 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 J3QR89 54 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 DPM2O94777 84 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 GAS8-AS1O95177 125 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
PRKN-204ENST00000366896 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
PRKN-204ENST00000366896 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ATP5LO75964 103 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 TNFRSF6BO95407 300 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 DSCR9P59020 149 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
PRKN-204ENST00000366896 Q8N9W7 124 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 FOXC2Q99958 501 aa11.31□□□□□ -0.6
PRKN-204ENST00000366896 TAL2Q16559 108 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF479Q96JC4 524 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 UNC79Q9P2D8 2635 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 ZNF207O43670 478 aaKnown RBP11.3□□□□□ -0.6
PRKN-204ENST00000366896 LMO4P61968 165 aa11.3□□□□□ -0.6
PRKN-204ENST00000366896 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 A0A1B0GV72 72 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 ERCC8Q13216 396 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 K7EMI3 77 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 BUB3O43684 328 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
PRKN-204ENST00000366896 ATP6V0BQ99437 205 aa11.29□□□□□ -0.6
PRKN-204ENST00000366896 SPAG8Q99932 426 aaPredicted RBP11.29□□□□□ -0.6
PRKN-204ENST00000366896 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 AGRNO00468 2067 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 H3BMG7 143 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 MAPKAPK5-AS1Q8N8E1 139 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 Q8N8P6 123 aa11.28□□□□□ -0.6
PRKN-204ENST00000366896 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 SLC25A16P16260 332 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ECSCRQ19T08 205 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 Q5PR19 223 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 SH2D6Q7Z4S9 175 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 HIF1ANQ9NWT6 349 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 ORM1P02763 201 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
PRKN-204ENST00000366896 UBE2E1P51965 193 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 C15orf32Q32M92 178 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
PRKN-204ENST00000366896 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
PRKN-204ENST00000366896 VPS13CQ709C8 3753 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 PRO0461Q9UI25 63 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
PRKN-204ENST00000366896 WNK2Q9Y3S1 2297 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 PPIFP30405 207 aaKnown RBP11.25□□□□□ -0.61
PRKN-204ENST00000366896 GAGE13Q4V321 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 MED13LQ71F56 2210 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 A0A096LNT2 108 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
PRKN-204ENST00000366896 ATP6V0E1O15342 81 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 IL17RELQ6ZVW7 336 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
PRKN-204ENST00000366896 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 CLEC3BP05452 202 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 PDZD2O15018 2839 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 ABCA2Q9BZC7 2435 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
PRKN-204ENST00000366896 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 A0A087WX48 190 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms