RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
SSU72-202ENST00000359060 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.62□□□□□ -1.03
SSU72-202ENST00000359060 SYNJ2BPP57105 145 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
SSU72-202ENST00000359060 C11orf44Q8N8P7 122 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 BEX4Q9NWD9 120 aaPredicted RBP8.61□□□□□ -1.03
SSU72-202ENST00000359060 MTORP42345 2549 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 GAGE10A6NGK3 116 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 SRSF1Q07955 248 aaKnown RBP eCLIP8.61□□□□□ -1.03
SSU72-202ENST00000359060 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
SSU72-202ENST00000359060 LAGE3Q14657 143 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 DEFB112Q30KQ8 113 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 LINC01356Q8N9X3 169 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
SSU72-202ENST00000359060 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
SSU72-202ENST00000359060 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
SSU72-202ENST00000359060 DPM2O94777 84 aa8.6□□□□□ -1.03
SSU72-202ENST00000359060 DKK2Q9UBU2 259 aa8.6□□□□□ -1.03
SSU72-202ENST00000359060 DSCR9P59020 149 aa8.6□□□□□ -1.03
SSU72-202ENST00000359060 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
SSU72-202ENST00000359060 IGHV3OR16-12A0A075B7B8 117 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 IGKCP01834 107 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 AJUBAQ96IF1 538 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 A0A087WWL8 130 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
SSU72-202ENST00000359060 Q8N976 141 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 SMG1Q96Q15 3661 aaKnown RBP8.59□□□□□ -1.03
SSU72-202ENST00000359060 PRRC2AP48634 2157 aaKnown RBP8.59□□□□□ -1.03
SSU72-202ENST00000359060 SLC25A16P16260 332 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 CTRLP40313 264 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 C16orf54Q6UWD8 224 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 SYT8Q8NBV8 401 aa8.59□□□□□ -1.03
SSU72-202ENST00000359060 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 DPH3P1Q9H4G8 78 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 H3BUT2 72 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 GNRH2O43555 120 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 COX11Q9Y6N1 276 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 TRAV12-2A0A075B6T6 113 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 A0A1W2PRX2 142 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 IGF1P05019 195 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 ANKRD39Q53RE8 183 aa8.58□□□□□ -1.04
SSU72-202ENST00000359060 LINC01545Q5VT33 79 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 NEGR1Q7Z3B1 354 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 ARL6IP6Q8N6S5 226 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 ORAOV1Q8WV07 137 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 IGHG2P01859 326 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 COX8AP10176 69 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 ZNF493Q6ZR52 646 aa8.57□□□□□ -1.04
SSU72-202ENST00000359060 SPINK13Q1W4C9 94 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 Q6ZS46 218 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 Q8N8P6 123 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 SMPXQ9UHP9 88 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
SSU72-202ENST00000359060 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 TMEM8BA6NDV4 472 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 GATA3P23771 443 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 HERVK_113P61574 105 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 ACANP16112 2415 aa8.56□□□□□ -1.04
SSU72-202ENST00000359060 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 Q6ZQT7 251 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 EMP1P54849 157 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 SUMO2P61956 95 aaKnown RBP8.55□□□□□ -1.04
SSU72-202ENST00000359060 MRPL53Q96EL3 112 aaKnown RBP8.55□□□□□ -1.04
SSU72-202ENST00000359060 JMJD8Q96S16 334 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
SSU72-202ENST00000359060 KLK9Q9UKQ9 250 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 PPP1R17O96001 155 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 BVES-AS1Q5T3Y7 98 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 PCP2Q8IVA1 136 aa8.55□□□□□ -1.04
SSU72-202ENST00000359060 CLPSL1A2RUU4 121 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 A6NDX4 124 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
SSU72-202ENST00000359060 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 GAS8-AS1O95177 125 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 FABP2P12104 132 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 HSD52Q0P140 79 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 OR9G4Q8NGQ1 327 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
SSU72-202ENST00000359060 IGHV3-73A0A0B4J1V6 119 aa8.54□□□□□ -1.04
SSU72-202ENST00000359060 TRAV8-2A0A0B4J237 113 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms