RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SIGLEC15Q6ZMC9 328 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 SLC25A45Q8N413 288 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 SHANK3Q9BYB0 1731 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 SRRM5B3KS81 715 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 Q8N1Y9 231 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 THAP8Q8NA92 274 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 BRWD3Q6RI45 1802 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 NDUFA4L2Q9NRX3 87 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 ERCC8Q13216 396 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 C5orf67F2Z3F1 127 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 EFNA4P52798 201 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 C3orf36Q3SXR2 165 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 FOXG1P55316 489 aaPredicted RBP4.85□□□□□ -1.63
VPS13B-203ENST00000358544 GGNQ86UU5 652 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 C15orf32Q32M92 178 aa4.85□□□□□ -1.63
VPS13B-203ENST00000358544 TRPT1Q86TN4 253 aaKnown RBP4.85□□□□□ -1.63
VPS13B-203ENST00000358544 NDUFA7O95182 113 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 Q71RC1 249 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-203ENST00000358544 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 NEU4Q8WWR8 484 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-203ENST00000358544 B9A039 149 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 LYPD6Q86Y78 171 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 IGKV3D-7A0A0C4DH55 119 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 GP9P14770 177 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 ARRDC1-AS1Q9H2J1 176 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 CRLF1O75462 422 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 IGHV3-11P01762 117 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 FAM110AQ9BQ89 295 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 METRNQ9UJH8 293 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 PRIMA1Q86XR5 153 aa4.84□□□□□ -1.63
VPS13B-203ENST00000358544 ADARB2-AS1A8MUL3 147 aa4.84□□□□□ -1.64
VPS13B-203ENST00000358544 WISP1O95388 367 aa4.84□□□□□ -1.64
VPS13B-203ENST00000358544 UBL5Q9BZL1 73 aa4.84□□□□□ -1.64
VPS13B-203ENST00000358544 H3BT86 120 aa4.84□□□□□ -1.64
VPS13B-203ENST00000358544 PRB3Q04118 309 aaPredicted RBP4.84□□□□□ -1.64
VPS13B-203ENST00000358544 SIGLEC9Q9Y336 463 aa4.84□□□□□ -1.64
VPS13B-203ENST00000358544 IGHV1-46P01743 117 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 A0A1B0GXF2 115 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 MRPL14Q6P1L8 145 aaKnown RBP4.83□□□□□ -1.64
VPS13B-203ENST00000358544 LINC00527Q9UJ94 153 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 PINLYPA6NC86 204 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 PRR19A6NJB7 356 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF876PQ49A33 203 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 UFSP1Q6NVU6 142 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 TRAV41A0A0B4J266 112 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 IGHV1-3A0A0C4DH29 117 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 C9orf139Q6ZV77 190 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 JPT2Q9H910 190 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 SDHAF1A6NFY7 115 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 M0R1W7 72 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 TCL1BO95988 128 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 VWCEQ96DN2 955 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 IGKV1-16P04430 117 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 CRYGBP07316 175 aa4.83□□□□□ -1.64
VPS13B-203ENST00000358544 LY6EQ16553 131 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 GDF5OSQ5U4N7 250 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 IGLV3-1P01715 115 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 B3GALT5-AS1P59052 145 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 SAP25Q8TEE9 199 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF524Q96C55 264 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 CELSR2Q9HCU4 2923 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 TM2D2Q9BX73 214 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 PAX8Q06710 450 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 C1orf159Q96HA4 380 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 IGHV1-8P0DP01 117 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 TP53TG3Q9ULZ0 132 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 ODF1Q14990 250 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 NDUFA11Q86Y39 141 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 KLK10O43240 276 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 A4D1N5 150 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 LINC00310P59036 64 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 RNF114Q9Y508 228 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 ATP1A1-AS1Q5TC04 95 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 PRR25Q96S07 402 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 IGSF10Q6WRI0 2623 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 ITPR1Q14643 2758 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 MALP21145 153 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 HAMPP81172 84 aa4.82□□□□□ -1.64
VPS13B-203ENST00000358544 TRIP6Q15654 476 aaKnown RBP4.81□□□□□ -1.64
VPS13B-203ENST00000358544 RHOHQ15669 191 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 COLCA1Q6ZS62 124 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 TRAV12-1A0A0B4J245 112 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 GATA1P15976 413 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-203ENST00000358544 BSPH1Q075Z2 132 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 IGLV3-19P01714 112 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 OOSP1A8MZH6 123 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 M0QXV9 152 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 WT1-ASQ06250 92 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
VPS13B-203ENST00000358544 ZNF833PQ6ZTB9 187 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms