RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PCP2Q8IVA1 136 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 CNFNQ9BYD5 112 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 IGHV7-81A0A0B4J1V7 117 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 IL4P05112 153 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 BLCAPP62952 87 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 LINC01559Q495D7 138 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 AAMDCQ9H7C9 122 aa9.75□□□□□ -0.85
RTFDC1-202ENST00000357348 Q6ZS46 218 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 PRR25Q96S07 402 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 MOB4Q9Y3A3 225 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 SPCS1Q9Y6A9 102 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 A6NDX4 124 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 HLA-DRB4P13762 266 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 FCGR2BP31994 310 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 RIPPLY3P57055 190 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 ECSCRQ19T08 205 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 ZNF562Q6V9R5 426 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 DKK2Q9UBU2 259 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 HHLA3Q9XRX5 114 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 HLA-DRB4X5D2U9 266 aa9.74□□□□□ -0.85
RTFDC1-202ENST00000357348 EGR2P11161 476 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-202ENST00000357348 CKS2P33552 79 aa9.73□□□□□ -0.85
RTFDC1-202ENST00000357348 Q6YL49 198 aa9.73□□□□□ -0.85
RTFDC1-202ENST00000357348 F8P00451 2351 aa9.73□□□□□ -0.85
RTFDC1-202ENST00000357348 ATP6V0E1O15342 81 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 BMI1P35226 326 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 ODF1Q14990 250 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 C9orf139Q6ZV77 190 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 PHLDA1Q8WV24 401 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 G3V318 75 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 SMIM13P0DJ93 91 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 FABP2P12104 132 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 EVI2AP22794 236 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 FCER1GP30273 86 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 NMUP48645 174 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 FXYD7P58549 80 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 NAA38Q9BRA0 125 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 S4R3C0 116 aa9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 NSD1Q96L73 2696 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-202ENST00000357348 F8W735 103 aaPredicted RBP9.71□□□□□ -0.85
RTFDC1-202ENST00000357348 SMKR1H3BMG3 65 aa9.71□□□□□ -0.85
RTFDC1-202ENST00000357348 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.85
RTFDC1-202ENST00000357348 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.85
RTFDC1-202ENST00000357348 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.85
RTFDC1-202ENST00000357348 IGLV11-55A0A075B6I3 123 aa9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 RAB37Q96AX2 223 aa9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 FANCD2OSQ96PS1 177 aa9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 TM2D2Q9BX73 214 aa9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 SMPXQ9UHP9 88 aa9.71□□□□□ -0.86
RTFDC1-202ENST00000357348 IGKV2-40A0A087WW87 121 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 IGKV2D-26A0A0A0MRZ7 120 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 IGKV2D-40P01614 121 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 IGHG4P01861 327 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 FXYD2P54710 66 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 TWIST1Q15672 202 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 INAFM1C9JVW0 142 aa9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 PRB4P10163 310 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 RPL7P18124 248 aaKnown RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 SETD2Q9BYW2 2564 aaPredicted RBP9.7□□□□□ -0.86
RTFDC1-202ENST00000357348 NIPBLQ6KC79 2804 aaeCLIP9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 TEP1Q99973 2627 aaKnown RBP9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 GNG7O60262 68 aa9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 MFAP4P55083 255 aa9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
RTFDC1-202ENST00000357348 IGLV2-18A0A075B6J9 118 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 ATP5LO75964 103 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 SRD5A1P18405 259 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 S100A7P31151 101 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 VGLL1Q99990 258 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 FN1P02751 2386 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 IGKCP01834 107 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 LEPP41159 167 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 TCTAP57738 103 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
RTFDC1-202ENST00000357348 E9PLD3 99 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 TEX29Q8N6K0 151 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 MSRB1Q9NZV6 116 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 SCGB1A1P11684 91 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 GCSHP23434 173 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 TAL2Q16559 108 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 CEND1Q8N111 149 aa9.67□□□□□ -0.86
RTFDC1-202ENST00000357348 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms