RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SRP14P37108 136 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CA7P43166 264 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00315P59091 139 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FOXF1Q12946 379 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 FAM104BQ5XKR9 115 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ZFAND6Q6FIF0 208 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR8B3Q8NGG8 313 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR10AG1Q8NH19 301 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 OR4X1Q8NH49 305 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM106AQ96A25 262 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 HSPB9Q9BQS6 159 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM70Q9BUB7 260 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 POPDC3Q9HBV1 291 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 NDUFB11Q9NX14 153 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 NAT8Q9UHE5 227 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 BOKQ9UMX3 212 aaPredicted RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 S4R3C0 116 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 ROBO3Q96MS0 1386 aa0.95□□□□□ -2.26
BRCA1-202ENST00000354071 CPSF1Q10570 1443 aaKnown RBP0.95□□□□□ -2.26
BRCA1-202ENST00000354071 KMT2DO14686 5537 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 NINQ8N4C6 2090 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LRCOL1A6NCL2 159 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 H3BQ15 152 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 H7C2G1 150 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SLC25A20O43772 301 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SSSCA1O60232 199 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 KLF7O75840 302 aaPredicted RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TRGC2P03986 189 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 IL4P05112 153 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 GYPBP06028 91 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CPMP14384 443 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 HIST1H1DP16402 221 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 GNG4P50150 75 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 KRTAP10-3P60369 221 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TNFRSF9Q07011 255 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 FUT5Q11128 374 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PLPPR5Q32ZL2 321 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MRPL51Q4U2R6 128 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PYCR3Q53H96 274 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM42Q69YG0 159 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CLECL1Q8IZS7 167 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LYG1Q8N1E2 194 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SLC22A24Q8N4F4 322 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 OR11H1Q8NG94 326 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 OR8A1Q8NGG7 326 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MYOZ3Q8TDC0 251 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CCL13Q99616 98 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 NIPSNAP1Q9BPW8 284 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PMCHL2Q9BQD1 86 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MIXL1Q9H2W2 232 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PSENENQ9NZ42 101 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 METTL1Q9UBP6 276 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 UFC1Q9Y3C8 167 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SPCS1Q9Y6A9 102 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MINOS1-NBL1R4GNA1 71 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 IGF2RP11717 2491 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PTPRQQ9UMZ3 2332 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 IGHV3OR16-8A0A075B7F1 116 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 C17orf98A8MV24 154 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PIN1P1O15428 100 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CST7O76096 145 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MT-ND6P03923 174 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 CD3DP04234 171 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 COX6B1P14854 86 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 PLGLB1Q02325 96 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SSBP1Q04837 148 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 KISS1Q15726 138 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MPV17LQ2QL34 196 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TMEM128Q5BJH2 165 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 DNLZQ5SXM8 178 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 C10orf91Q5T1B1 145 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MRPL54Q6P161 138 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 EXOC3-AS1Q8N2X6 119 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF664Q8N3J9 261 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 ST6GALNAC3Q8NDV1 305 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 OR8B12Q8NGG6 310 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 OR51H1Q8NH63 302 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF418Q8TF45 676 aaPredicted RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SLAMF6Q96DU3 332 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LINC00167Q96N53 147 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 ADAT1Q9BUB4 502 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 C1QTNF6Q9BXI9 259 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SMDT1Q9H4I9 107 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 NAA60Q9H7X0 242 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 R4GN34 69 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 DNAH10Q8IVF4 4471 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LCTP09848 1927 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 URB1O60287 2271 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 DUOX1Q9NRD9 1551 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 TECTAO75443 2155 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF638Q14966 1978 aaKnown RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LAMA1P25391 3075 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 BRWD1Q9NSI6 2320 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 LOC102725191A0A1B0GVB3 256 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 KNCNA6PVL3 124 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SDCBPO00560 298 aaPredicted RBP0.94□□□□□ -2.26
BRCA1-202ENST00000354071 DLEU1O43261 78 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 SH2D1AO60880 128 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 MPC2O95563 127 aa0.94□□□□□ -2.26
BRCA1-202ENST00000354071 HLA-DRB1P01911 266 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms