RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 IGHV4OR15-8A0A075B7B6 117 aa12.58□□□□□ -0.4
SAMM50-201ENST00000350028 A0A087WW49 117 aa12.58□□□□□ -0.4
SAMM50-201ENST00000350028 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
SAMM50-201ENST00000350028 LINC00173Q6ZV60 143 aa12.58□□□□□ -0.4
SAMM50-201ENST00000350028 KLHDC1Q8N7A1 406 aa12.58□□□□□ -0.4
SAMM50-201ENST00000350028 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 F6UB75 175 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 TCF21O43680 179 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 NPYP01303 97 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 DEFB1P60022 68 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 Q6ZQT7 251 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 TRAV9-2A0A087WT02 112 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 SMKR1H3BMG3 65 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-201ENST00000350028 WFDC11Q8NEX6 87 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
SAMM50-201ENST00000350028 NOTCH2Q04721 2471 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 J3KRW8 73 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-201ENST00000350028 RNASE4P34096 147 aaKnown RBP12.56□□□□□ -0.4
SAMM50-201ENST00000350028 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 MAP1LC3AQ9H492 121 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 OTOGQ6ZRI0 2925 aa12.56□□□□□ -0.4
SAMM50-201ENST00000350028 NCR2O95944 276 aa12.55□□□□□ -0.4
SAMM50-201ENST00000350028 SPATA12Q7Z6I5 190 aa12.55□□□□□ -0.4
SAMM50-201ENST00000350028 MRPL52Q86TS9 123 aaKnown RBP12.55□□□□□ -0.4
SAMM50-201ENST00000350028 SELENOKQ9Y6D0 94 aa12.55□□□□□ -0.4
SAMM50-201ENST00000350028 SETXQ7Z333 2677 aaKnown RBP12.55□□□□□ -0.4
SAMM50-201ENST00000350028 H3BVH4 76 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 K7EQG2 157 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 ASIPP42127 132 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 SNRPD3P62318 126 aaKnown RBP12.54□□□□□ -0.4
SAMM50-201ENST00000350028 ATOH7Q8N100 152 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 C2orf88Q9BSF0 95 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 ZNF747Q9BV97 191 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 KLLNB2CW77 178 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 M0R143 59 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 ODF3Q96PU9 254 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 UQCR10Q9UDW1 63 aa12.54□□□□□ -0.4
SAMM50-201ENST00000350028 LINC01546A6NGU7 62 aa12.53□□□□□ -0.4
SAMM50-201ENST00000350028 TNFRSF6BO95407 300 aa12.53□□□□□ -0.4
SAMM50-201ENST00000350028 IGLC3P0DOY3 106 aa12.53□□□□□ -0.4
SAMM50-201ENST00000350028 EVI2AP22794 236 aa12.53□□□□□ -0.4
SAMM50-201ENST00000350028 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
SAMM50-201ENST00000350028 NXT2Q9NPJ8 142 aaKnown RBP12.53□□□□□ -0.4
SAMM50-201ENST00000350028 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.4
SAMM50-201ENST00000350028 TEX15Q9BXT5 2789 aa12.52□□□□□ -0.41
SAMM50-201ENST00000350028 A0A096LNJ9 63 aa12.52□□□□□ -0.41
SAMM50-201ENST00000350028 LEPP41159 167 aa12.52□□□□□ -0.41
SAMM50-201ENST00000350028 TFPI2P48307 235 aa12.52□□□□□ -0.41
SAMM50-201ENST00000350028 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-201ENST00000350028 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.41
SAMM50-201ENST00000350028 HBDP02042 147 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 PSMG4Q5JS54 123 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 PRSS47A8MTI9 375 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 LINC01545Q5VT33 79 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 OR2K2Q8NGT1 345 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
SAMM50-201ENST00000350028 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 A0A0J9YX75 114 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 LINC01619G3V211 115 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 MAJINQ3KP22 176 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 DEFB125Q8N687 156 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 C4orf3Q8WVX3 66 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 MRAP2Q96G30 205 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
SAMM50-201ENST00000350028 EREGO14944 169 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 DUSP14O95147 198 aaKnown RBP12.49□□□□□ -0.41
SAMM50-201ENST00000350028 GAS8-AS1O95177 125 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 IGLL1P15814 213 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 DPF1Q92782 380 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 PHLDA3Q9Y5J5 127 aa12.49□□□□□ -0.41
SAMM50-201ENST00000350028 GNRH2O43555 120 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 Q8N8P6 123 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 FOXC2Q99958 501 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 ST20Q9HBF5 79 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 C7orf71A4D174 169 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
SAMM50-201ENST00000350028 SLURP1P55000 103 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 Q6ZSV7 163 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 C18orf65Q6ZTR6 163 aa12.48□□□□□ -0.41
SAMM50-201ENST00000350028 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 HSBP1L1C9JCN9 74 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 M0R381 172 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 CD5LO43866 347 aa12.47□□□□□ -0.41
SAMM50-201ENST00000350028 RNASE3P12724 160 aaKnown RBP12.47□□□□□ -0.41
SAMM50-201ENST00000350028 FCER1GP30273 86 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms