RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ID1P41134 155 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 AMTNQ6UX39 209 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 FLNCQ14315 2725 aa9.24□□□□□ -0.93
HDAC6-201ENST00000334136 FAM110DQ8TAY7 271 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-201ENST00000334136 GFRA4Q9GZZ7 299 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 H3BRM9 83 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 ERCC8Q13216 396 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 LAGE3Q14657 143 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 DDB2Q92466 427 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 TSSC4Q9Y5U2 329 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-201ENST00000334136 RITA1Q96K30 269 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 PROP1O75360 226 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 CKS1BP61024 79 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 PGPEP1Q9NXJ5 209 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 ZNF492Q9P255 531 aa9.23□□□□□ -0.93
HDAC6-201ENST00000334136 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 NDPQ00604 133 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 CT83Q5H943 113 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 TMEM75Q8N9X5 138 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 SMR3AQ99954 134 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 ZNF747Q9BV97 191 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 DKK2Q9UBU2 259 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 IGHV3OR16-12A0A075B7B8 117 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 TRAV2A0A0B4J234 112 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
HDAC6-201ENST00000334136 DYNAPQ8N1N2 210 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 Q8N9W7 124 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 RNF114Q9Y508 228 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 BRWD1-AS2P59051 145 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 ANAPC13Q9BS18 74 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 SHANK2-AS3Q9BTD1 123 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 PEMTQ9UBM1 199 aa9.22□□□□□ -0.93
HDAC6-201ENST00000334136 NPYP01303 97 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 TMEM95Q3KNT9 176 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 H3BMG7 143 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 K7EMI3 77 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 AVPP01185 164 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 C14orf178Q8N769 122 aaPredicted RBP9.21□□□□□ -0.93
HDAC6-201ENST00000334136 NPBQ8NG41 125 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.93
HDAC6-201ENST00000334136 TRBV7-1A0A0A6YYK4 115 aa9.21□□□□□ -0.94
HDAC6-201ENST00000334136 FAM223BA6NKX1 122 aa9.21□□□□□ -0.94
HDAC6-201ENST00000334136 FAM223AQ8IWN6 122 aa9.21□□□□□ -0.94
HDAC6-201ENST00000334136 SYT8Q8NBV8 401 aa9.21□□□□□ -0.94
HDAC6-201ENST00000334136 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
HDAC6-201ENST00000334136 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 A8MWV9 139 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 PATE2Q6UY27 113 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 DMDP11532 3685 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 IGHV7-81A0A0B4J1V7 117 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 K7EP34 96 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 NDUFB8O95169 186 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 CD7P09564 240 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 RNF182Q8N6D2 247 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 SMPXQ9UHP9 88 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 A0A0U1RRA0 63 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
HDAC6-201ENST00000334136 A6NDX4 124 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 TAX1BP3O14907 124 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 TMEM86BQ8N661 226 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 MRAP2Q96G30 205 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 TRAV26-2A0A0B4J265 109 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 ELANEP08246 267 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-201ENST00000334136 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 KLF5Q13887 457 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-201ENST00000334136 Q6YL49 198 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
HDAC6-201ENST00000334136 SPINK8P0C7L1 97 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 LYPD1Q8N2G4 141 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
HDAC6-201ENST00000334136 ITPR3Q14573 2671 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 E7EUB6 86 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 LGALS9BQ3B8N2 356 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 LGALS9CQ6DKI2 356 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 IGF2BP2-AS1Q96M15 143 aa9.18□□□□□ -0.94
HDAC6-201ENST00000334136 MRPL36Q9P0J6 103 aaKnown RBP9.18□□□□□ -0.94
HDAC6-201ENST00000334136 C1orf229Q6ZS94 237 aaPredicted RBP9.17□□□□□ -0.94
HDAC6-201ENST00000334136 TRAV21A0A0B4J279 112 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
HDAC6-201ENST00000334136 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms