RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.3
DDX28-201ENST00000332395 CENPEQ02224 2701 aa13.21□□□□□ -0.3
DDX28-201ENST00000332395 CBY3A6NI87 242 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 SMKR1H3BMG3 65 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 FAM106AQ4KMX7 169 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 Q6ZQT7 251 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 OVOL1O14753 267 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 IGHV4-31P0DP07 118 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 PRR9Q5T870 116 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 SMIM15Q7Z3B0 74 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 VPS25Q9BRG1 176 aa13.2□□□□□ -0.3
DDX28-201ENST00000332395 NCR2O95944 276 aa13.19□□□□□ -0.3
DDX28-201ENST00000332395 NPYP01303 97 aa13.19□□□□□ -0.3
DDX28-201ENST00000332395 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
DDX28-201ENST00000332395 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 FSHBP01225 129 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 SMPXQ9UHP9 88 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 DEFB1P60022 68 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 PRSS57Q6UWY2 283 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
DDX28-201ENST00000332395 A0A096LNJ9 63 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 K7EMT4 169 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
DDX28-201ENST00000332395 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 CR1P17927 2039 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 EDN2P20800 178 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 Q5PR19 223 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 SELENOKQ9Y6D0 94 aa13.17□□□□□ -0.3
DDX28-201ENST00000332395 TMEM89A2RUT3 159 aa13.16□□□□□ -0.3
DDX28-201ENST00000332395 H0Y8G0 127 aa13.16□□□□□ -0.3
DDX28-201ENST00000332395 J3KRW8 73 aa13.16□□□□□ -0.3
DDX28-201ENST00000332395 LINC01545Q5VT33 79 aa13.16□□□□□ -0.3
DDX28-201ENST00000332395 TRAV8-6A0A0B4J262 113 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 Q6YL49 198 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 F6UB75 175 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 LRRC75A-AS1Q8N1F1 130 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 PMCHL2Q9BQD1 86 aa13.15□□□□□ -0.3
DDX28-201ENST00000332395 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
DDX28-201ENST00000332395 EPG5Q9HCE0 2579 aa13.15□□□□□ -0.31
DDX28-201ENST00000332395 SNAI2O43623 268 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 GAS8-AS1O95177 125 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 COX8AP10176 69 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 SRD5A1P18405 259 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 C2orf91Q6ZV80 131 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 GAGE12BA1L429 117 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 EVI2AP22794 236 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 MAP1LC3AQ9H492 121 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
DDX28-201ENST00000332395 TRAV21A0A0B4J279 112 aa13.13□□□□□ -0.31
DDX28-201ENST00000332395 H3BVH4 76 aa13.13□□□□□ -0.31
DDX28-201ENST00000332395 IGHV4-4A0A075B6R2 117 aa13.13□□□□□ -0.31
DDX28-201ENST00000332395 K7ERU9 68 aa13.13□□□□□ -0.31
DDX28-201ENST00000332395 HBDP02042 147 aa13.13□□□□□ -0.31
DDX28-201ENST00000332395 ABCA12Q86UK0 2595 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 TNFRSF6BO95407 300 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 FXYD7P58549 80 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 CACNG7P62955 275 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 SPANXN1Q5VSR9 72 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 ZNF702PQ9H963 129 aa13.12□□□□□ -0.31
DDX28-201ENST00000332395 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
DDX28-201ENST00000332395 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
DDX28-201ENST00000332395 Q96MF0 132 aa13.11□□□□□ -0.31
DDX28-201ENST00000332395 GATA1P15976 413 aaPredicted RBP13.11□□□□□ -0.31
DDX28-201ENST00000332395 SEC11AP67812 179 aa13.11□□□□□ -0.31
DDX28-201ENST00000332395 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
DDX28-201ENST00000332395 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 C7orf71A4D174 169 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 RNASE4P34096 147 aaKnown RBP13.1□□□□□ -0.31
DDX28-201ENST00000332395 ID1P41134 155 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 SAMD13Q5VXD3 122 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
DDX28-201ENST00000332395 KIR3DS1Q14943 382 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 TMEM97Q5BJF2 176 aa13.1□□□□□ -0.31
DDX28-201ENST00000332395 MXRA5Q9NR99 2828 aa13.09□□□□□ -0.31
DDX28-201ENST00000332395 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
DDX28-201ENST00000332395 ELANEP08246 267 aa13.09□□□□□ -0.31
DDX28-201ENST00000332395 WFDC3Q8IUB2 231 aa13.09□□□□□ -0.31
DDX28-201ENST00000332395 MYOZ3Q8TDC0 251 aa13.09□□□□□ -0.31
DDX28-201ENST00000332395 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
DDX28-201ENST00000332395 LGALS1P09382 135 aaKnown RBP13.08□□□□□ -0.31
DDX28-201ENST00000332395 ANXA2RQ3ZCQ2 193 aa13.08□□□□□ -0.31
DDX28-201ENST00000332395 UFSP1Q6NVU6 142 aa13.08□□□□□ -0.31
DDX28-201ENST00000332395 DPF1Q92782 380 aa13.08□□□□□ -0.31
DDX28-201ENST00000332395 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 FGF6P10767 208 aa13.07□□□□□ -0.32
DDX28-201ENST00000332395 S100A4P26447 101 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms