RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 KCNS1Q96KK3 526 aa11.46□□□□□ -0.57
LRRC28-202ENST00000331450 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 IGKV3D-20A0A0C4DH25 116 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 TEX48A0A1B0GUV7 120 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 PGPEP1LA6NFU8 196 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 TYMSP04818 313 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 TCL1AP56279 114 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 PEA15Q15121 130 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 C11orf45Q8TAV5 145 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 SDF2L1Q9HCN8 221 aa11.45□□□□□ -0.58
LRRC28-202ENST00000331450 IGHV3-16A0A0C4DH30 117 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 SPART-AS1P0CW21 52 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 ZNF415Q09FC8 603 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 DAZ2Q13117 558 aaKnown RBP11.44□□□□□ -0.58
LRRC28-202ENST00000331450 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 GSN-AS1Q9NRJ2 163 aa11.44□□□□□ -0.58
LRRC28-202ENST00000331450 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
LRRC28-202ENST00000331450 CXorf65A6NEN9 183 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 SNURFLB1AK76 121 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 GNRH2O43555 120 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 CEBPGP53567 150 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 ZNF575Q86XF7 245 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 MDFICQ9P1T7 246 aa11.43□□□□□ -0.58
LRRC28-202ENST00000331450 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 KRBOX1C9JBD0 128 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 K7EN84 100 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 NANOS2P60321 138 aaKnown RBP11.42□□□□□ -0.58
LRRC28-202ENST00000331450 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 PRR27Q6MZM9 219 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 OCC1Q8TAD7 63 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 MUC7Q8TAX7 377 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
LRRC28-202ENST00000331450 LY96Q9Y6Y9 160 aa11.42□□□□□ -0.58
LRRC28-202ENST00000331450 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
LRRC28-202ENST00000331450 M0R036 132 aa11.41□□□□□ -0.58
LRRC28-202ENST00000331450 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
LRRC28-202ENST00000331450 DNLZQ5SXM8 178 aa11.41□□□□□ -0.58
LRRC28-202ENST00000331450 B4DEV8 164 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 SPINK4O60575 86 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 ORM1P02763 201 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
LRRC28-202ENST00000331450 FAM74A3Q4VXF1 159 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 Q6ZTC4 211 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 SPXQ9BT56 116 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
LRRC28-202ENST00000331450 MUC4Q99102 2169 aa11.4□□□□□ -0.59
LRRC28-202ENST00000331450 CXCL1P09341 107 aa11.39□□□□□ -0.59
LRRC28-202ENST00000331450 RPL19P84098 196 aaKnown RBP11.39□□□□□ -0.59
LRRC28-202ENST00000331450 OR5I1Q13606 314 aa11.39□□□□□ -0.59
LRRC28-202ENST00000331450 Q6ZTI0 123 aa11.39□□□□□ -0.59
LRRC28-202ENST00000331450 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
LRRC28-202ENST00000331450 DAD1P61803 113 aa11.38□□□□□ -0.59
LRRC28-202ENST00000331450 LGALS9BQ3B8N2 356 aa11.38□□□□□ -0.59
LRRC28-202ENST00000331450 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
LRRC28-202ENST00000331450 LINC00862A6NCI5 91 aa11.37□□□□□ -0.59
LRRC28-202ENST00000331450 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
LRRC28-202ENST00000331450 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
LRRC28-202ENST00000331450 ASIPP42127 132 aa11.37□□□□□ -0.59
LRRC28-202ENST00000331450 MRPL16Q9NX20 251 aaKnown RBP11.37□□□□□ -0.59
LRRC28-202ENST00000331450 IL36BQ9NZH7 164 aa11.37□□□□□ -0.59
LRRC28-202ENST00000331450 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 TMSB15BA0A087X1C1 80 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 TRGV1A0A0A0MS02 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GRIFINA4D1Z8 144 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GAGE7O76087 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GAGE12FP0CL80 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GAGE12GP0CL81 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 GAGE12IP0CL82 117 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 UQCC3Q6UW78 93 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 PHLDA1Q8WV24 401 aaPredicted RBP11.36□□□□□ -0.59
LRRC28-202ENST00000331450 RASL10AQ92737 203 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
LRRC28-202ENST00000331450 TRAV10A0A0B4J240 114 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 H3BVH4 76 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 M0R2P5 195 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 P01737 135 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 MED14OSP0DP75 135 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 PTH2Q96A98 100 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 DAZAP1Q96EP5 407 aaKnown RBP11.35□□□□□ -0.59
LRRC28-202ENST00000331450 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
LRRC28-202ENST00000331450 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 NAT8Q9UHE5 227 aa11.35□□□□□ -0.59
LRRC28-202ENST00000331450 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
LRRC28-202ENST00000331450 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
LRRC28-202ENST00000331450 RPL23P62829 140 aaKnown RBP11.34□□□□□ -0.59
LRRC28-202ENST00000331450 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
LRRC28-202ENST00000331450 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
LRRC28-202ENST00000331450 DNAH7Q8WXX0 4024 aa11.33□□□□□ -0.6
LRRC28-202ENST00000331450 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms