RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
RAB39A-201ENST00000320578 FABP4P15090 132 aa13.29□□□□□ -0.28
RAB39A-201ENST00000320578 RNASE4P34096 147 aaKnown RBP13.29□□□□□ -0.28
RAB39A-201ENST00000320578 LINC00310P59036 64 aa13.28□□□□□ -0.28
RAB39A-201ENST00000320578 CACNG7P62955 275 aa13.28□□□□□ -0.28
RAB39A-201ENST00000320578 CD300EQ496F6 205 aaPredicted RBP13.28□□□□□ -0.28
RAB39A-201ENST00000320578 TMEM191AQ9H0A3 160 aa13.28□□□□□ -0.28
RAB39A-201ENST00000320578 SERF1AO75920 110 aa13.27□□□□□ -0.28
RAB39A-201ENST00000320578 NTF3P20783 257 aa13.27□□□□□ -0.28
RAB39A-201ENST00000320578 FAM104BQ5XKR9 115 aa13.27□□□□□ -0.28
RAB39A-201ENST00000320578 OR10D4PQ8NGN7 298 aa13.27□□□□□ -0.28
RAB39A-201ENST00000320578 C7orf71A4D174 169 aa13.27□□□□□ -0.29
RAB39A-201ENST00000320578 HLA-DRB4P13762 266 aa13.27□□□□□ -0.29
RAB39A-201ENST00000320578 TWIST1Q15672 202 aa13.27□□□□□ -0.29
RAB39A-201ENST00000320578 HIST2H2BDQ6DRA6 164 aa13.27□□□□□ -0.29
RAB39A-201ENST00000320578 ZNF256Q9Y2P7 627 aaPredicted RBP13.27□□□□□ -0.29
RAB39A-201ENST00000320578 HLA-DRB4X5D2U9 266 aa13.27□□□□□ -0.29
RAB39A-201ENST00000320578 NUPR1O60356 82 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 CD33P20138 364 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 CDKN1BP46527 198 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 AMTNQ6UX39 209 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 OR2K2Q8NGT1 345 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 CLUHP3Q96NS8 147 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 U3KQK5 164 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 NF1P21359 2839 aa13.26□□□□□ -0.29
RAB39A-201ENST00000320578 ZNF324O75467 553 aaPredicted RBP13.25□□□□□ -0.29
RAB39A-201ENST00000320578 DEFB131AP59861 70 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 TDRG1Q3Y452 100 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 ANXA2RQ3ZCQ2 193 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 Q6ZQT7 251 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 ASIPP42127 132 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
RAB39A-201ENST00000320578 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
RAB39A-201ENST00000320578 H3BMM0 161 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 J3KRW8 73 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 KRTAP10-3P60369 221 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 C12orf57Q99622 126 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 MAP6D1Q9H9H5 199 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 HIVEP1P15822 2718 aa13.24□□□□□ -0.29
RAB39A-201ENST00000320578 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
RAB39A-201ENST00000320578 FAM159AQ6UWV7 190 aa13.23□□□□□ -0.29
RAB39A-201ENST00000320578 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
RAB39A-201ENST00000320578 PPBPP02775 128 aa13.22□□□□□ -0.29
RAB39A-201ENST00000320578 NSUN5P1Q3KNT7 163 aa13.22□□□□□ -0.29
RAB39A-201ENST00000320578 RCHY1Q96PM5 261 aa13.22□□□□□ -0.29
RAB39A-201ENST00000320578 FN1P02751 2386 aaKnown RBP13.22□□□□□ -0.29
RAB39A-201ENST00000320578 S100A4P26447 101 aaKnown RBP13.21□□□□□ -0.29
RAB39A-201ENST00000320578 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
RAB39A-201ENST00000320578 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.29
RAB39A-201ENST00000320578 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
RAB39A-201ENST00000320578 CHCHD1Q96BP2 118 aaKnown RBP13.21□□□□□ -0.29
RAB39A-201ENST00000320578 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
RAB39A-201ENST00000320578 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 H3BVH4 76 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
RAB39A-201ENST00000320578 PYY3Q5JQD4 70 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 MUC21Q5SSG8 566 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 AMN1Q8IY45 258 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 ORMDL3Q8N138 153 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 JOSD1Q15040 202 aaPredicted RBP13.2□□□□□ -0.3
RAB39A-201ENST00000320578 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 LAMTOR2Q9Y2Q5 125 aa13.2□□□□□ -0.3
RAB39A-201ENST00000320578 CUBNO60494 3623 aa13.19□□□□□ -0.3
RAB39A-201ENST00000320578 NXPH4O95158 308 aa13.19□□□□□ -0.3
RAB39A-201ENST00000320578 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
RAB39A-201ENST00000320578 RAB4AP20338 218 aa13.19□□□□□ -0.3
RAB39A-201ENST00000320578 NIT1Q86X76 327 aa13.19□□□□□ -0.3
RAB39A-201ENST00000320578 SAMD10Q9BYL1 202 aa13.19□□□□□ -0.3
RAB39A-201ENST00000320578 M0R2Z0 102 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 GNRH2O43555 120 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 SAP30O75446 220 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 IGKV3-20P01619 116 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 SPINK13Q1W4C9 94 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 PHLDA3Q9Y5J5 127 aa13.18□□□□□ -0.3
RAB39A-201ENST00000320578 IGHV1OR15-1A0A075B7D0 117 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 D6R8Y8 96 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 LINC00614P0C842 121 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 PMCHP20382 165 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 SSTP61278 116 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 PRR31Q5SQ13 230 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
RAB39A-201ENST00000320578 HSBP1O75506 76 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 CKS2P33552 79 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 AMTP48728 403 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 LINC00482Q8N8I6 264 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 TRAV12-2A0A075B6T6 113 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
RAB39A-201ENST00000320578 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
RAB39A-201ENST00000320578 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms