RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 IGLV11-55A0A075B6I3 123 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 IGHV1OR15-1A0A075B7D0 117 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 TEX22C9J3V5 150 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 NBL1P41271 181 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 TCF15Q12870 199 aa13.48□□□□□ -0.25
GABRB3-202ENST00000311550 CHD3Q12873 2000 aaKnown RBP13.48□□□□□ -0.25
GABRB3-202ENST00000311550 ANAPC13Q9BS18 74 aa13.47□□□□□ -0.25
GABRB3-202ENST00000311550 CTSGP08311 255 aa13.47□□□□□ -0.25
GABRB3-202ENST00000311550 ATXN8Q156A1 80 aa13.47□□□□□ -0.25
GABRB3-202ENST00000311550 F8VRH5 84 aa13.47□□□□□ -0.25
GABRB3-202ENST00000311550 C1orf122Q6ZSJ8 110 aa13.47□□□□□ -0.25
GABRB3-202ENST00000311550 IGHV7-4-1A0A0J9YVY3 117 aa13.46□□□□□ -0.25
GABRB3-202ENST00000311550 IGLV1-47P01700 117 aa13.46□□□□□ -0.25
GABRB3-202ENST00000311550 TCTEX1D4Q5JR98 221 aa13.46□□□□□ -0.25
GABRB3-202ENST00000311550 C9JAW5 83 aa13.46□□□□□ -0.25
GABRB3-202ENST00000311550 NPBQ8NG41 125 aa13.46□□□□□ -0.25
GABRB3-202ENST00000311550 CDKN1BP46527 198 aa13.46□□□□□ -0.26
GABRB3-202ENST00000311550 HLA-DRB4P13762 266 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 HLA-DRB4X5D2U9 266 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 IGHV3-38A0A0C4DH36 116 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 CENPVL3A0A0U1RRI6 287 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 ETDBQ3ZM63 59 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 ACACBO00763 2458 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 RASL10AQ92737 203 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 K7EP13 123 aa13.45□□□□□ -0.26
GABRB3-202ENST00000311550 SP5Q6BEB4 398 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-202ENST00000311550 IGF2-ASQ6U949 168 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 K7EP34 96 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 GATA3P23771 443 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 C22orf34Q6ZV56 151 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 PRIMA1Q86XR5 153 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 I3L3M4 83 aa13.44□□□□□ -0.26
GABRB3-202ENST00000311550 PAX4O43316 350 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 CFHR3Q02985 330 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 CGB3P0DN86 165 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 CGB7P0DN87 165 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 ANKRD39Q53RE8 183 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 A0A1W2PPM0 123 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 PRAC2D3DTV9 90 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 CKS1BP61024 79 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 KLF12Q9Y4X4 402 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 CEND1Q8N111 149 aa13.43□□□□□ -0.26
GABRB3-202ENST00000311550 IGKV1D-37A0A075B6S9 117 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 Q8N7P7 452 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 DEFB130BP0DP73 79 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 DEFB130AP0DP74 79 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 AMTNQ6UX39 209 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 GATD1Q8NB37 220 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 UTRNP46939 3433 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 A0A087WX48 190 aa13.42□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE12JA6NER3 117 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE4Q13068 117 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE5Q13069 117 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 LINC01619G3V211 115 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE2BQ13066 116 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 INS-IGF2F8WCM5 200 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
GABRB3-202ENST00000311550 Q8N9W7 124 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 CRPP02741 224 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 EIF4EBP1Q13541 118 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-202ENST00000311550 TMEM86BQ8N661 226 aa13.41□□□□□ -0.26
GABRB3-202ENST00000311550 IGHV4-61A0A0C4DH41 118 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 CCL25O15444 150 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 IGHV4-59P01825 116 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 H3BMG7 143 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 BUB3O43684 328 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 C20orf78Q9BR46 151 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 PRSS29PA6NIE9 313 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 BLCAPP62952 87 aa13.4□□□□□ -0.26
GABRB3-202ENST00000311550 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.26
GABRB3-202ENST00000311550 RBAKDNA6NC62 111 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
GABRB3-202ENST00000311550 ADORA2A-AS1P86434 159 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 WI2-2373I1.2A0A1W2PRP0 233 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 DEFB125Q8N687 156 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-202ENST00000311550 ZFAND6Q6FIF0 208 aa13.39□□□□□ -0.27
GABRB3-202ENST00000311550 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 Q96MF0 132 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 C6orf226Q5I0X4 101 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 LINC00322Q6ZN03 302 aaPredicted RBP13.38□□□□□ -0.27
GABRB3-202ENST00000311550 TTTY13Q9BZ97 58 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
GABRB3-202ENST00000311550 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 RHODO00212 210 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
GABRB3-202ENST00000311550 Q8NA96 180 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
GABRB3-202ENST00000311550 SIVA1O15304 175 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms